Table 1.
Gene name, matrix completeness, aligned length, parsimony informative sites (ingroup), evolutionary and clock models.
| Gene name | Ixodes homolog | Matrix % Complete | Aligned length | PI sites | Model of evolution | Clock model |
|---|---|---|---|---|---|---|
| Ecotropic viral integration site protein, putative | ISCW 021220 | 75% | 508 bp | 58 | HKY+I | Relaxed |
| Protein phosphatase 2A regulatory subunit A, putative | ISCW 003443 | >75% | 242 bp | 37 | HKY+ Γ | Strict |
| RING finger protein, putative | ISCW 003817 | >95% | 214 bp | 32 | GTR+I | Strict |
| Protein transport protein Sec24A, putative | ISCW 016134 | >95% | 364 bp | 37 | GTR+ Γ | Relaxed |
| Neuromusculin, putative | ISCW 006547 | >95% | 197 bp | 22 | HKY+ Γ | Relaxed |
| 28S | >95% | 1094 bp | 71 | GTR+I+ Γ | Relaxed | |
| COI (all) | 100% | 549 bp | 249 | GTR+ Γ | Relaxed | |
| COI (pos1) | GTR+ Γ | |||||
| COI (pos2) | HKY+I+ Γ | |||||
| COI (pos 3) | GTR+Γ |
Note: PI, parsimony informative.