Figure 5.
RosettaLigand energy score vs RMSD of PSD-95 with CRIPT and liprin peptides obtained from the flexible docking with (A) BP-Dock and (B) Backrub ensembles. Hydrogen bond interactions are shown for the CRIPT peptide with PSD-95 as analyzed using the lowest energy docked pose obtained from (C) BP-Dock and (D) Backrub ensembles. Ribbon diagrams are prepared using PyMOL.60