Table 4. Comparisons between TetraOrigin (bvModel) and H2013 obtained from the real potato data.

Chromosome:	I	II	III	IV	V	VI	VII	VIII	IX	X	XI	XII
No. of SNPs:	142	120	74	152	119	122	89	85	91	104	85	118
No. of mismatchesa:	0	0	6	0	0	0	0	0	6	12	6	4
Δloglb:	0	0	164.4	0	0	0	0	0	21.4	1248.4	227.7	309.3
Consistencyc:	0.91	0.91	0.84	0.88	0.93	0.88	0.91	0.90	0.72	0.86	0.70	0.92

^aThe number of mismatches between the parental haplotypes estimated from TetraOrigin and those from H2013.

^bThe log likelihood given the TetraOrigin estimated parental haplotypes minus that given the H2013 estimated parental haplotypes.

^cThe fraction of ancestral states called by their maximum posterior probabilities that are consistent between two methods.