TABLE 2.
Oligonucleotides used in this study
| Name | Sequence (5′–3′) | Target | Reference or source |
|---|---|---|---|
| sigH-F | CTGAATTCGGAGGAATACAGGCAGTTATGGATAATTCAGTGA | sigH | This study |
| sigH-R | CTTAGGTCGACAATTGTTTTTTCATTCTAGC | sigH | This study |
| V05 | GGATCGAATTCTCAAACATAGAGGAGTTG | comK | This study |
| V06 | CTACTCTGCAGTAGCTGGCTTTTATTTA | comK | This study |
| V07 | GTCATGAATTCAATTATATCCTC | comG promoter | This study |
| V09 | CGACCTCAATCCGGTAGTTTTGAAAAAA | comGA | This study |
| V10 | AGGGGATGGCATTTTTCTCCGCAGAAGG | comGA | This study |
| V11 | CATGGATCCAAGAACCTCCTTACAA | comG promoter | This study |
| V12 | ATGAAGGCAGCTATTTATATACGCG | int | This study |
| V13 | GTAATTGTTTTGCTTCTTCTTC | int | This study |
| V14 | CGGCGAATTCTTCTGCAAGCAATCTC | comK upstream region | This study |
| V15 | TTCATTCCCGGGCTCTATGTTTGTAT | comK upstream region | This study |
| V28 | ATCCCGGGCAGCTACGTAATAGTAGCTGGC | comK downstream region | This study |
| V29 | TTAGATCTAGGTGGAGTAGCATCTGTTGG | comK downstream region | This study |
| V38 | GGATACCAGATGGTAAAACAGATACAG | comEA | This study |
| V39 | CTACTGTTTTTTCGCCAATACCTGAAACG | comEA | This study |
| V40 | CGGGGATCCCAAGTTCAATTTGTACCTAAA | sigH upstream region | This study |
| V43 | TAGCTGCAGCGGCTCCTTTACGACAGGAT | sigH upstream region | This study |
| V44 | AGAGGATCCGATGGAACAAATTCTGCTTG | sigH upstream region | This study |
| V45 | AAACTGCAGTGACTAGCTAAGAGCCAAATG | sigH downstream region | This study |
| V46 | TCTGTCGACTCGGCTTCTCGTTTAAACTC | sigH downstream region | This study |
| V47 | TTTGTCGACCCGGAGTAAGTATGAACTAC | sigH downstream region | This study |
| V53 | GCCGTCGACTTCCTGAATAAATCTTTCA | Pspa (pRIT5H) | This study |
| V63 | ATCTTCCCGGGAAGACTGTATCAAGAA | comFA | This study |
| V64 | CACTTTTTCTCTGGTGTTGCTGTGATTA | comFA | This study |
| V67 | CGAATTTTACAAGCTCTATCGTTCCCAT | comEC | This study |
| V68 | TGTAGCAGCTCGTATGACTGGCGGA | comEC | This study |
| OP133 | CACCTGGAGTAAACCAATTAGTACG | rpoB | 28 |
| OP134 | TAGTGGGTTAAGCATGATATCAACA | rpoB | 28 |