Table 2.
SNP1 | Chr.2 | Location3 | MA4 | OR5 | MAF6 | Empirical power | Empirical type I error rate |
---|---|---|---|---|---|---|---|
rs4971486 | 2 | 4895318 | G | 1.936 | 0.2223 | 0.686 | 4.51 |
rs6745523 | 2 | 4908703 | A | 1.939 | 0.1768 | 0.518 | 3.30 |
rs1371477 | 2 | 4909920 | T | 1.867 | 0.1761 | 0.438 | 3.61 |
rs12648678 | 4 | 175598280 | G | 0.5091 | 0.1699 | 0.516 | 3.70 |
rs2171139 | 4 | 175624314 | C | 0.5196 | 0.1735 | 0.503 | 3.80 |
rs2443547 | 5 | 18173672 | C | 0.5911 | 0.4329 | 0.621 | 3.90 |
rs2923765 | 5 | 18177252 | T | 1.682 | 0.4588 | 0.588 | 3.70 |
rs2972927 | 5 | 18178225 | T | 0.5846 | 0.4381 | 0.626 | 4.60 |
rs2923756 | 5 | 18192581 | G | 1.836 | 0.1972 | 0.443 | 3.40 |
rs12514191 | 5 | 18198169 | G | 1.804 | 0.194 | 0.404 | 2.90 |
rs315825 | 5 | 18198934 | A | 0.595 | 0.4334 | 0.612 | 2.91 |
rs2938412 | 5 | 18205107 | A | 1.603 | 0.4472 | 0.434 | 4.20 |
rs453891 | 5 | 18212493 | T | 0.5946 | 0.4361 | 0.606 | 3.60 |
rs1316610 | 5 | 18230131 | C | 1.835 | 0.1893 | 0.453 | 2.60 |
rs2972892 | 5 | 18234352 | T | 0.5945 | 0.4548 | 0.633 | 3.30 |
rs2938451 | 5 | 18236104 | A | 0.5798 | 0.4186 | 0.672 | 3.10 |
rs2962166 | 5 | 18258575 | T | 0.5867 | 0.4183 | 0.627 | 3.90 |
rs2972911 | 5 | 18258703 | A | 0.5932 | 0.4432 | 0.605 | 2.70 |
rs2019973 | 5 | 134573992 | T | 0.6216 | 0.4691 | 0.441 | 3.41 |
rs2769921 | 13 | 107794883 | C | 0.577 | 0.43 | 0.690 | 3.40 |
rs12709954 | 19 | 56716579 | T | 0.5784 | 0.2874 | 0.515 | 3.22 |
SNP identifier according to the dbSNP database
Chromosome
Physical location of SNP based on human gene assembly 19
Minor allele
Odds ratios
Minor allele frequency