Skip to main content
. 2016 May 9;7:639. doi: 10.3389/fmicb.2016.00639

Table 2.

Transcriptome gene hits to the Saxitoxin biosynthesis gene cluster in Cylindrospermopsis raciborskii T3.

Gene name in Cylindrospermopsis raciborskii T3 Name Count Average E-value Average AA
%Similarity HSP Length
SxtA polyketide synthase-related protein SxtA 10 1.00E-06 48% 433.7
SxtB cytidine deaminase SxtB 1 7.00E-36 55% 233.0
SxtD Sterol desaturase SxtD 1 7.00E-08 46% 155.0
SxtF sodium-driven multidrug and toxic compound extrusion protein SxtF 1 5.00E-04 41% 358.0
SxtG amidinotransferase SxtG 4 5.00E-13 50% 291.8
SxtH phenylpropionate dioxygenase SxtH 16 1.72E-06 44% 186.1
SxtI NodU/CmcH-related carbamoyltransferase SxtI 3 3.33E-07 50% 327.7
SxtN sulfotransferase SxtN 1 6.00E-05 39% 285.0
SxtO adenylylsulfate kinase SxtO 2 5.10E-45 66% 177.0
SxtS phytanoyl-CoA dioxygenase SxtS 2 3.60E-04 43% 181.0
SxtT phenylpropionate dioxygenase SxtT 14 2.79E-06 45% 187.0
SxtU short-chain alcohol dehydrogenase SxtU 53 2.14E-05 48% 146.9
SxtW ferredoxin SxtW 5 1.85E-04 51% 64.8
SxtZ histidine kinase SxtZ 11 3.69E-07 44% 278.7
HisA-related protein HisA 1 5.00E-05 51% 73.0
Transcriptional regulator OmpR family ompR 10 6.92E-07 59% 128.3
Unknown 1 4.00E-22 69% 94.0
Total Sxt gene pathway hits 136
Number of Unique S. trochoidea contigs 112

Approximately 50% of the biosynthesis cluster had significant hits to S. trochoidea (17 of the 34).