Table 2. Characteristics of representative nucleoprotein gene sequences for rabies virus isolates, Mali, 2006–2013* .
Isolate | Haplotype | Identical sequences (−546 nt of the N gene) | Phylogroup |
---|---|---|---|
RV09 | 2 | RV50, RV56, RV51, RV19, RV79 | G (Africa 2) |
RV96 | 6 | RV84, RV95 | G (Africa 2) |
RV90 | 11 | RV67, RV60, RV68, RV88, RV89, RV22 | H (Africa 2) |
RV87 | 14 | RV14, RV27 | H (Africa 2) |
*All identical sequences have 100% nucleoprotein (N) gene identity on the basis of 546 nt (positions 71–618) compared with the reference isolate. RV, rabies virus.