Table 2.
FAIRE transgenic reporters
| Reporter | FP | Enrichment p-value | Flanks VB Gene # | Gene TSS |
|---|---|---|---|---|
| A | Supercont1.551:501192–503018 | 8.27104E-39 | AAEL011197 | Supercont1.551: 507860 |
| B | Supercont1.440:550819–551917 | 2.40519E-06 | AAEL009947 | Supercont1.440: 551773 |
| C | Supercont1.381:720103–720682 | 0.001345953 | AAEL009224 | Supercont1.381: 720570 |
| D | Supercont1.2641:1068–1902 | 1.61139E-10 | AAEL015489 | Supercont1.2641: 1778 |
| E | Supercont1.911:297903–298590 | 3.79289E-08 | AAEL013757 | Supercont1.911: 294736 |
| F | Supercont1.16:273854–274851 | 7.14776E-11 | AAEL000765 | Supercont1.16: 283224 |
| G | Supercont1.237:1279560–1280173 | 0.000437431 | AAEL007110 | Supercont1.237: 1269860 |
| H | Supercont1.174:341062–341799 | 3.97961E-10 | AAEL005776 | Supercont1.174: 357279 |
| I | Supercont1.128:2089446–2090042 | 0.000177296 | AAEL004719 | Supercont1.128: 2098660 |
| J | Supercont1.635:654750–655775 | 6.27856E-26 | AAEL011943 | Supercont1.635: 655775 |
| K | Supercont1.160:604315–605761 | 1.43933E-45 | AAEL005507 | Supercont1.160: 435622 |
The FP DNA sequences listed were tested for their ability to drive GFP reporter expression in D. melanogaster transgenics. These reporter assays confirmed that all of the indicated sequences function as regulatory elements (see Fig. 4 for results). The p-values for enrichment, flanking genes, and TSSs of the flanking genes are noted