Table 2.
Data set statistics for human ChIP-seq data. For each of the five transcription factors (TFs) CTCF, GABP, NRSF, SRF, and STAT1, we specify the (i) average length of transcription factor binding site (TFBS), the (ii) number of alignments, and the (iii) average length of alignments
TF | TFBS length | Number of alignments | Avg. length |
---|---|---|---|
CTCF | 20 bp | 467 | 213 bp |
GABP | 12 bp | 451 | 236 bp |
NRSF | 21 bp | 460 | 245 bp |
SRF | 12 bp | 394 | 242 bp |
STAT1 | 11 bp | 360 | 244 bp |