TABLE 2.
Gene | Protein function | Abundance ratio from MS dataa | Primer set, plasmidb | Degradationc | Reference(s)d |
---|---|---|---|---|---|
FTL663 | Hypothetical protein | 3.786 | Pr7261/Pr7262, pST4609 | Yes | 8 |
FTL1957 | Heat shock protein | 2.447 | Pr7263/Pr7264, pST4611 | Yes | 46 |
FTL578, ocd | Ornithine cyclodeaminase | 2.118 | Pr7755/Pr7756, pST5007 | Yes | 64 |
FTL1217 | Hypothetical protein | 2.022 | Pr7751/Pr7752, pST5009 | Yes | |
FTL1191, dnaK | Molecular chaperone DnaK | 1.409 | Pr10091/Pr10092, pST6935 | No | 64 |
FTL1267 | Hypothetical protein | 1.350 | Pr10095/Pr10096, pST6937 | No | 7 |
FTL891, tig | Trigger factor | 1.338 | Pr10083/Pr10084, pST6931 | No | 8 |
FTL1609, flmK | Dolichyl-phosphate-mannose protein | 1.145 | Pr10099/Pr10100, pST6939 | No | 7 |
FTL1228, sufD | SufS activator complex, SufD subunit | 1.059 | Pr10093/Pr10094, pST6936 | Yes | 6 |
FTL893, clpX | ClpX | 1.028 | Pr7522/Pr7523, pST4819 | No | 8 |
FTL1017, cmk | Cytidylate kinase | 1.011 | Pr7518/Pr7519, pST4818 | No | |
FTL478, gcvH | Glycine cleavage system protein H | 1.000 | Pr7516/Pr7517, pST4816 | No | 7 |
FTL398, purE | Phosphoribosylaminoimidazole carboxylase, catalytic subunit | 0.983 | Pr10077/Pr10078, pST6928 | No | 7 |
FTL1358 | Cation efflux family protein | 0.957 | Pr10097/Pr10098, pST6938 | No | 7 |
FTL1611, yfdH | Glycosyl transferase family protein | 0.932 | Pr9901/Pr9902, pST7048 | No | 7 |
FTL1724 | Lipoprotein | 0.887 | Pr9903/Pr9904, pST7049 | No | 7 |
FTL87 | Acetyltransferase | 0.881 | Pr9891/Pr9892, pST7043 | No | 77 |
FTL40 | LysR family transcriptional regulator | 0.856 | Pr10075/Pr10076, pST6927 | No | 6 |
FTL599, wbtG | Glycosyl transferase family protein | 0.838 | Pr9897/Pr9898 pST7046 | No | 7 |
FTL687, emrA1 | HlyD family secretion protein | 0.814 | Pr10081/Pr10082 pST6930 | No | 7 |
FTL593 | Galactosyl transferase | 0.797 | Pr9893/Pr9894 pST7044 | No | 78 |
FTL595, wbtE | Galacturonosyl transferase | 0.794 | Pr9895/Pr9896 pST7045 | No | 7, 79 |
Ratio of abundance of the protein in the Δlon mutant to that in the wild-type strains.
Primer set used to amplify each target gene and pACYCDuet derivative containing the target gene.
Degradable or undegradable by the F. tularensis Lon protease in E. coli.
Previous characterization if available.