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. 2016 Apr 22;84(5):1387–1402. doi: 10.1128/IAI.00076-16

TABLE 2.

F. tularensis proteins tested for Lon degradation in Lon-deficient E. coli

Gene Protein function Abundance ratio from MS dataa Primer set, plasmidb Degradationc Reference(s)d
FTL663 Hypothetical protein 3.786 Pr7261/Pr7262, pST4609 Yes 8
FTL1957 Heat shock protein 2.447 Pr7263/Pr7264, pST4611 Yes 46
FTL578, ocd Ornithine cyclodeaminase 2.118 Pr7755/Pr7756, pST5007 Yes 64
FTL1217 Hypothetical protein 2.022 Pr7751/Pr7752, pST5009 Yes
FTL1191, dnaK Molecular chaperone DnaK 1.409 Pr10091/Pr10092, pST6935 No 64
FTL1267 Hypothetical protein 1.350 Pr10095/Pr10096, pST6937 No 7
FTL891, tig Trigger factor 1.338 Pr10083/Pr10084, pST6931 No 8
FTL1609, flmK Dolichyl-phosphate-mannose protein 1.145 Pr10099/Pr10100, pST6939 No 7
FTL1228, sufD SufS activator complex, SufD subunit 1.059 Pr10093/Pr10094, pST6936 Yes 6
FTL893, clpX ClpX 1.028 Pr7522/Pr7523, pST4819 No 8
FTL1017, cmk Cytidylate kinase 1.011 Pr7518/Pr7519, pST4818 No
FTL478, gcvH Glycine cleavage system protein H 1.000 Pr7516/Pr7517, pST4816 No 7
FTL398, purE Phosphoribosylaminoimidazole carboxylase, catalytic subunit 0.983 Pr10077/Pr10078, pST6928 No 7
FTL1358 Cation efflux family protein 0.957 Pr10097/Pr10098, pST6938 No 7
FTL1611, yfdH Glycosyl transferase family protein 0.932 Pr9901/Pr9902, pST7048 No 7
FTL1724 Lipoprotein 0.887 Pr9903/Pr9904, pST7049 No 7
FTL87 Acetyltransferase 0.881 Pr9891/Pr9892, pST7043 No 77
FTL40 LysR family transcriptional regulator 0.856 Pr10075/Pr10076, pST6927 No 6
FTL599, wbtG Glycosyl transferase family protein 0.838 Pr9897/Pr9898 pST7046 No 7
FTL687, emrA1 HlyD family secretion protein 0.814 Pr10081/Pr10082 pST6930 No 7
FTL593 Galactosyl transferase 0.797 Pr9893/Pr9894 pST7044 No 78
FTL595, wbtE Galacturonosyl transferase 0.794 Pr9895/Pr9896 pST7045 No 7, 79
a

Ratio of abundance of the protein in the Δlon mutant to that in the wild-type strains.

b

Primer set used to amplify each target gene and pACYCDuet derivative containing the target gene.

c

Degradable or undegradable by the F. tularensis Lon protease in E. coli.

d

Previous characterization if available.