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. 2016 Apr 22;84(5):1585–1592. doi: 10.1128/IAI.01239-15

TABLE 1.

Data collection and processinga

Parameter Result(s)
Data collection
    Synchrotron station SRS 14.1
    Wavelength (Å) 1.488
    Space group P21
    Cell dimensions a = 55.35 Å, b = 107.99 Å, c = 55.65Å, α = 90°, β = 92.14°, γ = 90°
    Maximal resolution (Å) 1.70
    Highest-resolution bin (Å) 1.79–1.70
    No. of observations 217,593 (31,047)
    No. of unique reflections 71,591 (10,454)
    Completeness (%) 99.9 (99.9)
    Rmergeb 0.075 (0.295)
    I/σ(I) 5.1 (2.4)
Refinement
    No. of protein atomsc 3,483
        No. of residues, chains A, B, and C 204–355
    No. of water molecules 531
    No. of calcium ions 9
    No. of ligand atoms 44
    Rworkd (%) 19.2
    Rfreee (%) 21.0
    RMSD bond length (Å) 0.007
    RMSD bond angle (°) 1.2
    Average B-values (Å2)
        Protein main chain 21.6
        Water 33.3
        Other heteroatoms 29.4
Ramachandran plot valuesf (%)
    Favored 98.0
    Outliers 0.0
a

Numbers in parentheses refer to the highest-resolution bin. RMSD, root mean square deviation.

b

Rmerge = ΣhΣj |Ih,jIh|/ΣhΣj |Ih,j|, where Ih,j is the jth observation of reflection h and Ih is the mean of the j measurements of reflection h.

c

Excluding alternative side chain conformations.

d

Rwork = Σh ||Foh| − |Fch||/Σh |Foh|, where Foh and Fch are the observed and calculated structure factor amplitudes, respectively, for reflection h.

e

Rfree is equivalent to Rwork for a randomly selected subset (5%) of reflections not used in the refinement.

f

Defined according to Molprobity.