TABLE 1.
Data collection and processinga
Parameter | Result(s) |
---|---|
Data collection | |
Synchrotron station | SRS 14.1 |
Wavelength (Å) | 1.488 |
Space group | P21 |
Cell dimensions | a = 55.35 Å, b = 107.99 Å, c = 55.65Å, α = 90°, β = 92.14°, γ = 90° |
Maximal resolution (Å) | 1.70 |
Highest-resolution bin (Å) | 1.79–1.70 |
No. of observations | 217,593 (31,047) |
No. of unique reflections | 71,591 (10,454) |
Completeness (%) | 99.9 (99.9) |
Rmergeb | 0.075 (0.295) |
I/σ(I) | 5.1 (2.4) |
Refinement | |
No. of protein atomsc | 3,483 |
No. of residues, chains A, B, and C | 204–355 |
No. of water molecules | 531 |
No. of calcium ions | 9 |
No. of ligand atoms | 44 |
Rworkd (%) | 19.2 |
Rfreee (%) | 21.0 |
RMSD bond length (Å) | 0.007 |
RMSD bond angle (°) | 1.2 |
Average B-values (Å2) | |
Protein main chain | 21.6 |
Water | 33.3 |
Other heteroatoms | 29.4 |
Ramachandran plot valuesf (%) | |
Favored | 98.0 |
Outliers | 0.0 |
Numbers in parentheses refer to the highest-resolution bin. RMSD, root mean square deviation.
Rmerge = ΣhΣj |Ih,j − Ih|/ΣhΣj |Ih,j|, where Ih,j is the jth observation of reflection h and Ih is the mean of the j measurements of reflection h.
Excluding alternative side chain conformations.
Rwork = Σh ||Foh| − |Fch||/Σh |Foh|, where Foh and Fch are the observed and calculated structure factor amplitudes, respectively, for reflection h.
Rfree is equivalent to Rwork for a randomly selected subset (5%) of reflections not used in the refinement.
Defined according to Molprobity.