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. 2016 Apr 22;84(5):1501–1513. doi: 10.1128/IAI.01463-15

TABLE 2.

Primers used in this study

Primer Sequence
Cloning
    P1 ATAGAAAAGTTGAGCGATTCAGCTTTATAC
    P2 TGTACAAACTTGAATACCGCACTGCTAAAAC
    P3 TGTACAAAGTGGCGCTTAGGGTGAAAGTGC
    P4 ATAATAAAGTTGGATACTCGGATTAATCGG
    P5 ATAGAAAAGTTGATGCCGTCTGAAAATTAAGTTAGAATTATCCC
    P6 GGGGACTGCTTTTTTGTACAAACTTGAAATCCAAAATCATACTG
    P7 GGGGACAAGTTTGTACAAAAAAGCAGGCTGACTTTGCTGACTCAGGATT
    P8 GGGGACCACTTTGTACAAGAAAGCTGGGTAAATACCGTCTGAAACCTG
    K1 AAAAAGCAGGCTGTATTAGTGACCTGTAGAATTCGAGC
    K2 AGAAAGCTGGGTTTAGAAAAACTCATCGAGCATCAAATG
    Lac-pnpfw TAACAATTTCACACAGGAAACAGCTTTGAAAGGAACAATAATGTTCAATAA
    Pnp-down CATTCATTCCCGATACCCGTAAAAA
    Lac_up TCCCCATCGGTGATGTCGTATAAGA
    Lac-PNPrev TTATTGAACATTATTGTTCCTTTCAAAGCTGTTTCCTGTGTGAAATTGTTA
    PilEUHSfw ATAGAAAAGTTGAGGCGGATGTGTAAGGTAGATG
    PilEUHSrev TGTACAAACTTGCGATCAGGGTGAAACCTT
    PilEDHSfw CTTGTACAAAGTGGACCTGCCGCACCAAATAA
    PilEDHSrev ATAATAAAGTTGGCAGGGAAATGGGTAGGGA
    attB1_Tet_fw AAAAAGCAGGCTACCTTTCCGAACAAGA
    attB2_Tet_rev CAAGAAAGCTGGGTTTCAGACGGCATTGGGT
    TetRfw TTTTTTTCAAACGAAGTCAGCCCCATACGATATAAG
    TetRrev TTCCATTCAGGTCGAGGTGGCC
    NMC50fw ATGTCAATCAATACGTTTGAAACCTTTATTTACG
    NMC50rev GGGCTGACTTCGTTTGAAAAAAAAGCGTG
    SiaCfw ATGCCGTCTGAATATGAACGATTTATCTGAAGC
    SiaCrev GATGAATAAGACTCCAGCTTAAATATATTTATTCAATATCAGTTTTTTTG
    NMC49fw ACCTGAATGGAATCAACTATTTCTTCTTCTAAACCATTTAG
    NMC49rev TTGACAATAGAGCGAAAAAGTACCGCG
    SiaE-Tetfw ATATATTTAAGCTGGAGTCTTATTCATCATGTCAATCAATACGTTTG
    SiaE-Tetrev AGAAATAGTTGATTCCATTCAGGTCGAGGTG
    PNPpurfw TTGAAAGGAACAATAATGTTCAATAAACAC
    PNPpurrev TTACTCGGCGGCATTTTC
qPCR
    PNP_qPCR_fw TTGGGCGACGAAGACCACTT
    PNP_qPCR_rev TGTGCAGACGCGCTTCTTTG
    S10_qPCR_fw TTGGAAATCCGCACCCACTT
    S10_qPCR_rev TACATCAACACCGGCCGACAAA
    PilN_qPCR_fw GAGATGAACAAGCGCAAACA
    PilN_qPCR_rev AAGTGTGCGATGGAGGTTTC
    PilO_qPCR_fw CAGATGGAATCCCTTGAGGA
    PilO_qPCR_rev GAACCTGCCTGATGAAGCTC
    PilW_qPCR_fw AACTACGGCTGGTTCCTGTG
    PilW_qPCR_rev GTGCGCGCCAGTTCTTTAAA