Skip to main content
. 2016 May 11;4:41. doi: 10.3389/fcell.2016.00041

Table 2.

Examples of typical reaction types of ODE models.

# Stoichiometry Reaction type Flux Contribution to dAdt
1 ∅ → A Production k Positive/influx
2 A → ∅, B Degradation, transformation k · A Negative/outflux
3 A + AAA Dimerization k · A2 Negative/outflux
4 BA Transformation k · B Positive/influx
5 B + CA Binding k · B · C Positive/influx
6 BA Inhibition by C k·B·1q+C Positive/influx
7 BA Michaelis-Menten k·B·1q+B Positive/influx
8 A + BC Binding k · A · B Negative/outflux
9 AB Inhibition by C k·A·1q+C Negative/outflux
10 AB Michaelis-Menten k·A·1q+A Negative/outflux
11 BA Hill k·Bq2q1q2+Bq2 Positive/influx
12 ∅ → A Self-activation k·Aq2q1q2+Aq2 Positive/influx
13 B + CA Power-law k·Bq1·Cq2 Positive/influx

All types are covered by our steady-state approach.