TABLE 1 .
Details of S. salmonicida annexins
| Name | ORFa | NCBI accession no. |
Amino acid |
Mol wtb | pIb | Extension length (aa) |
Expression (FPKM)c |
|
|---|---|---|---|---|---|---|---|---|
| N terminus | C terminus | |||||||
| ANX1 | SS50377_18313 | EST42007.1 | 303 | 35,620 | 7.7 | 7 | 3 (KAQ) | 75.240 |
| ANX2 | SS50377_18314 | EST42008.1 | 304 | 34,579 | 5.3 | 7 | 3 (DAK) | 249.132 |
| ANX3 | Not annotated | Not annotated | 321 | 35,512 | 5.1 | 24 | 2 (GL) | NAd |
| ANX4 | SS50377_12156 | EST47757.1 | 313 | 36,021 | 5.2 | 16 | 3 (GQE) | 612.426 |
| ANX5 | SS50377_10477 | EST49256.1 | 311 | 35,640 | 5.1 | 16 | 2 (GF) | 435.131 |
| ANX6 | SS50377_12139 | EST47740.1 | 281 | 32,160 | 5.5 | 14 | 3 (GLK) | 8.416 |
| ANX7 | SS50377_15726 | EST44420.1 | 309 | 35,607 | 7.2 | 13 | 4 (NLKS) | 7.091 |
| ANX8 | SS50377_18312 | EST42006.1 | 299 | 34,581 | 5.5 | 7 | 1 (N) | 2.813 |
| ANX9 | SS50377_14057 | EST46067.1 | 300 | 33,997 | 6.6 | 3 | 3 (GLS) | 307.464 |
| ANX10 | SS50377_17349 | EST43046.1 | 299 | 34,021 | 8.9 | 6 | 13 (ENVGG NLFKKC CG) |
118.044 |
| ANX11 | SS50377_12743 | EST47233.1 | 314 | 36,141 | 5.3 | 13 | 3 (GFK) | 1.395 |
| ANX12 | SS50377_12051 | EST47860.1 | 329 | 36,344 | 6.2 | 31 | 2 (GL) | 1,555.338 |
| ANX13 | SS50377_15889 | EST44286.1 | 459 | 53,675 | 4.7 | 176 | 2 (QI) | 16.638 |
| ANX14 | SS50377_15273 | EST44827.1 | 336 | 37,960 | 8.7 | 2 | 0 | 9.756 |
a
ORF, open reading frame.
b
Biophysical values predicted by ExPASy ProtParam.
c
RNA-Seq expression value from mixed logarithmic and stationary-phase culture extracted from GiardiaDB. FPKM, fragments per kilobase of transcript per million fragments mapped.
d
NA, not applicable.