Skip to main content
. Author manuscript; available in PMC: 2016 Sep 10.
Published in final edited form as: Nature. 2016 Mar 10;531(7593):258–262. doi: 10.1038/nature17194

Extended Data Figure 1. Sequence alignment of TPCs with TPC1 experimental and predicted secondary structure.

Extended Data Figure 1

A sequence alignment based on seven human and plant TPC orthologs with observed TPC1 (black) and secondary structure predictions by Psipred48 (red) and Jpred49 (blue). Helices are shown as cylinders, beta sheets as planks, coil as solid lines, and unstructured regions as dashed lines. Level of conservation is indicated by color (>50% yellow; >80% red). Blue dots ( Inline graphic) mark arginines in S4. Red dots ( Inline graphic) mark charge-transfer anions. Green dots ( Inline graphic) mark Ca2+-binding sites in the EF-hand. Solid and dashed green lines represent observed and absent peptides from mass spectrometry experiments. Magenta stars ( Inline graphic), orange stars ( Inline graphic), cyan stars ( Inline graphic), blue stars ( Inline graphic), black stars (★), and grey stars ( Inline graphic) mark observed phosphorylation sites using ESI-MS (Extended Data Fig. 3a), potential phosphorylation sites identified by truncation constructs (Extended Data Fig. 3e), predicted phosphorylation sites by NetPhosK50, non-phosphorylated sites, unlikely sites due to solvent inaccessibility, and mark unknown or unidentified regions, respectively.