Table 7. Relative FPKMs of 22 DEGs of interest in BC9 following BmNPV infection.
| Name | Gene ID | P50- FPKM | P50+ FPKM | BC9- FPKM | BC9+ FPKM | BC9- vs. P50- FPKM | BC9+_vs._BC9- FPKM |
|---|---|---|---|---|---|---|---|
| Peptidoglycan-recognition protein 2 | BGIBMGA000583 | 300.13 | 229.37 | 197.96 | 121.57 | 0.66 | 0.61 |
| Adenylate cyclase type 5 | BGIBMGA002064 | 3.52 | 2.39 | 3.48 | 1.14 | 0.99 | 0.33 |
| Pyruvate dehydrogenase kinase | BGIBMGA003258 | 6.21 | 5.93 | 4.52 | 3.21 | 0.73 | 0.71 |
| MFS-type transporter | BGIBMGA003409 | 50.65 | 47.67 | 15.50 | 6.82 | 0.31 | 0.44 |
| Actin cytoskeleton-regulatory complex protein PAN1 | BGIBMGA004121 | 83.02 | 99.50 | 54.24 | 28.43 | 0.65 | 0.52 |
| B(0,+)-type amino acid transporter 1 | BGIBMGA007713 | 34.46 | 33.02 | 25.86 | 18.79 | 0.75 | 0.73 |
| EF-hand domain-containing protein CG10641 | BGIBMGA008867 | 36.74 | 28.33 | 25.33 | 18.58 | 0.69 | 0.73 |
| Lactase-phlorizin hydrolase | BGIBMGA010811 | 1751.88 | 1141.90 | 913.76 | 411.25 | 0.52 | 0.45 |
| EN protein binding/engrailed nuclear homeoprotein-regulated protein | BGIBMGA011701 | 49.08 | 54.49 | 37.03 | 27.34 | 0.75 | 0.74 |
| Antimicrobial protein 6Tox | BGIBMGA000861 | 0.59 | 0.37 | 3.91 | 0.26 | 6.57 | 0.07 |
| Facilitated trehalose transporter Tret1 | BGIBMGA004426 | 3.90 | 6.88 | 9.06 | 3.19 | 2.32 | 0.35 |
| Protease inhibitor 6 | BGIBMGA004869 | 7.51 | 6.49 | 51.58 | 4.39 | 6.86 | 0.09 |
| Lebocin-3 | BGIBMGA006775 | 4.28 | 2.53 | 26.72 | 0.91 | 6.25 | 0.03 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase alpha | BGIBMGA007880 | 7.70 | 2.58 | 17.19 | 8.46 | 2.23 | 0.49 |
| Hemolin | BGIBMGA008736 | 0.00 | 0.02 | 52.63 | 0.14 | NA | 0.00 |
| Integument esterase 2 | BGIBMGA009544 | 2.39 | 2.49 | 8.48 | 1.12 | 3.55 | 0.13 |
| Alanine aminotransferase 2 | BGIBMGA011984 | 0.34 | 0.13 | 9.50 | 0.13 | 27.59 | 0.01 |
| Otoferlin | BGIBMGA012258 | 0.02 | 0.04 | 2.23 | 0.05 | 96.93 | 0.02 |
| U2AF function domain protein | BGIBMGA013991 | 0.00 | 0.07 | 2.95 | 0.15 | NA | 0.05 |
| Defense protein precursor | BGIBMGA014360 | 0.16 | 8.50 | 4.23 | 0.20 | 26.18 | 0.05 |
| Prostatic acid phosphatase | BGIBMGA014369 | 71.98 | 60.03 | 111.41 | 54.97 | 1.55 | 0.49 |
| Zinc Ribbon domain protein | NewGene_1603 | 0.00 | 0.00 | 2.17 | 0.00 | NA | 0.00 |
The ratio represents the fold change in the FPKM value after infection with BmNPV; a ratio ≥ 1.2 indicates genes that were up-regulated, a ratio ≤ 0.83 indicates genes that were down-regulated. Abbreviation: na, not applicable.