Table 4.
The significant connections returned from sscMap using the breast cancer optimal gene signature based on the case study with dataset GSE15852, comparing 43 breast tumors with their paired normal tissues
| Compound | Replicates | cscore | p value | zscore | SM | PS |
|---|---|---|---|---|---|---|
| IC-86621 | 4 | –0.079 | 5.0E-06 | –4.84 | 1 | 1.00 |
| Trichostatin A | 182 | –0.080 | 5.0E-06 | –4.07 | 1 | 1.00 |
| Semustine | 4 | –0.082 | 1.0E-04 | –3.82 | 1 | 1.00 |
| W-13 | 2 | –0.091 | 8.0E-05 | –3.77 | 1 | 1.00 |
| Copper sulfate | 4 | –0.066 | 1.5E-04 | –3.63 | 1 | 1.00 |
| Exemestane | 1 | –0.136 | 2.8E-04 | –3.58 | 1 | 1.00 |
| Vorinostat | 12 | –0.087 | 1.9E-04 | –3.47 | 1 | 1.00 |
| Danazol | 4 | –0.053 | 2.5E-04 | –3.43 | 1 | 1.00 |
| Dexverapamil | 1 | –0.127 | 5.8E-04 | –3.34 | 1 | 1.00 |
| 15-delta prostaglandin J2 | 15 | –0.051 | 6.4E-04 | –3.20 | 1 | 0.73 |