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. 2016 May 12;9:269. doi: 10.1186/s13104-016-2072-9

Table 5.

Relative assembly scores for different read lengths

Quality metric Read length Genome
Bce Efa Sen Pst
Corrected NG50 100 0.52 0.68 0.54 0.996
125 0.82 0.90 0.79 0.995
150 0.90 0.96 0.81 1
175 1 1 0.95 0.995
189 0.91 0.996 1 0.99
max** 541,348 419,532 358,280 213,754
NGA50 100 0.55 0.95 0.71 1
125 0.75 1 0.86 0.86
150 0.78 0.97 0.85 0.96
175 0.996 0.99 0.94 0.98
189 1 0.999 1 0.97
max** 898,406 424,840 455,293 249,244

Read length associated relative assembly scores are listed per genome for SPAdes assemblies. Relative assembly scores for Sen were determined in dependence on 3 assembly sets each. Each other genome comprised 6 assembly sets per relative assembly score

max** Absolute value in nucleotides of the maximal relative assembly score of the column