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. Author manuscript; available in PMC: 2016 May 12.
Published in final edited form as: J Med Genet. 2015 Sep 2;52(11):762–769. doi: 10.1136/jmedgenet-2015-103142

Table 3.

Sex-by-SNP Interaction GWAS Meta-analysis in Caucasians (2,827 women and 1,582 men)

SNP Chr Gene Alleles SNP-by-Sex Men
Women
Interaction-P MAF Beta P-values MAF Beta P-values
rs6953348 7 BBS9* G -> A 1.05E-06 0.22 0.52 1.23E-05 0.18 −0.10 1.74E-01
rs10283141 8 RUNX1T1; SLC26A7 G -> A 5.86E-07 0.04 0.86 4.43E-05 0.04 −0.49 3.89E-03
rs1519847 8 MLZE C -> T 4.34E-06 0.37 0.29 2.67E-03 0.39 −0.23 1.32E-04
rs1563374 11 MRGPRX3 C -> A 4.07E-09 0.02 1.73 2.61E-05 0.02 −1.24 2.30E-05
rs4550343 13 SLITRK6 G -> A 8.86E-06 0.29 0.39 1.16E-04 0.32 −0.15 2.62E-02
rs6135498 20 MACROD2* T -> C 2.04E-06 0.41 −0.31 1.65E-03 0.40 0.25 1.17E-04

In each locus, only the most significantly associated SNP is listed.

Bold: SNPs with genome-wide significance (interaction p-values <5E-08)

*

SNPs are located inside genes