Table 2. Summary statistics for the three separate Angora sub-populations and the merged Angora population.
Population | Average MAF* | Average PHE* | Average PHO* | Average PHE** | Average PHO** | Inbreeding coefficient (f)* | Inbreeding coefficient (f)** |
---|---|---|---|---|---|---|---|
Argentina | 0.29 | 0.397 | 0.414 | 0.397 | 0.417 | -0.047 | -0.051 |
France | 0.26 | 0.380 | 0.378 | 0.369 | 0.375 | -0.003 | -0.016 |
South Africa | 0.25 | 0.371 | 0.365 | 0.364 | 0.365 | 0.009 | -0.0029 |
Merged | 0.30 | 0.398 | 0.368 | 0.400 | 0.382 | 0.081 | 0.047 |
* Calculated across polymorphic SNP (after QC)
** Calculated after LD-pruning