Table 2. List of identified miRNAs associated with S. japonicum EVs.
| Small RNA IDs | Genomic locations | Sequences | Reads* | miRNAs | |||
|---|---|---|---|---|---|---|---|
| t0000001 | SJC_S000052 | 314799 | 314820 | + | AACCCTGTAGACCCGAGTTTGG | 347581 | sja-miR-10-5p |
| t0000002 | SJC_S000383 | 359175 | 359196 | − | TCCCTGAGACTGATAATTGCTC | 260493 | sja-miR-125b |
| t0000121 | SJC_S000664 | 24730 | 24752 | + | TGACTAGAAAGTGCACTCACTTC | 9634 | sja-miR-61 |
| t0000305 | SJC_S000054 | 245393 | 245413 | − | CGTCTCAAAGGACTGTGAGCC | 4215 | sja-miR-2b-5p |
| t0000329 | SJC_S000254 | 288019 | 288040 | + | TGAGATCGCGATTAAAGCTGGT | 3990 | sja-bantam |
| t0000380 | SJC_S000471 | 22294 | 22314 | − | TATTATGCAACGTTTCACTCT | 3513 | sja-miR-2162-3p |
| t0000902 | SJC_S005824 | 19633 | 19653 | + | GGAGGTAGTTCGTTGTGTGGT | 1845 | sja-let-7 |
| t0000918 | SJC_S004051 | 17258 | 17277 | + | GGAGGATCGATGAACGGAGC | 1837 | sja-miR-8185 |
| t0001442 | SJC_S000001 | 925810 | 925830 | − | TAAATGCATTTTCTGGCCCGT | 1627 | sja-miR-277 |
| t0001782 | SJC_S000027 | 600247 | 600269 | − | CCACCGGGTAGACATTCATTCGC | 1489 | sja-miR-36-3p |
| t0001800 | SJC_S000136 | 315901 | 315920 | + | GCCACAACAGTTCGAGGACG | 1485 | sja-miR-3489 |
| t0001943 | SJC_S000102 | 364554 | 364577 | + | TATCACAGTCCTGCTTAGGTGACG | 1389 | sja-miR-2d-3p |
| t0002884 | SJC_S001823 | 36300 | 36318 | + | TCCTCGAACTGTTGTGGCC | 910 | sja-miR-3487 |
| t0003609 | SJC_S000102 | 364617 | 364637 | + | ACCCTTGTTCGACTGTGATGT | 873 | sja-miR-2c-5p |
| t0005423 | SJC_S000054 | 245575 | 245597 | − | TGAAAGACGATGGTAGTGAGATG | 804 | sja-miR-71a |
| t0000521 | SJC_S000701 | 78619 | 78639 | + | ACAAGCGTGACTGTCTGGACT | 2829 | novel-miR-2 |
| t0000605 | SJC_S000769 | 22845 | 22864 | + | TTGCTGGAGGAACCTTGGAC | 2577 | novel-miR-6 |
| t0001185 | SJC_S002785 | 117 | 136 | + | TACTCTACTTGTCTCTGCCT | 1711 | novel-miR-8 |
| t0002232 | SJC_S001298 | 37776 | 37796 | + | AGTTCAATCGTGTCGGGTGTT | 988 | novel-miR-22 |
| t0002527 | SJC_S005847 | 716 | 735 | − | CTTCGGTCGTGTTTCGCTGC | 939 | novel-miR-26 |
| t0002974 | SJC_S002475 | 9923 | 9943 | + | TAGCTGTAGTTGCAGGTCCCT | 905 | novel-miR-15 |
| t0003581 | SJC_S000112 | 267998 | 268018 | + | ACGAACCGGACTGAGTTCGAT | 874 | novel-miR-23 |
| t0003576 | SJC_S001710 | 68535 | 68556 | + | GACACGGAGCGGACTGAGTTCG | 874 | novel-miR-24 |
| t0003932 | SJC_S000418 | 57959 | 57979 | + | CTGAGCCCCATGATGTCGGTT | 860 | novel-miR-30 |
| t0004374 | SJC_S000483 | 41623 | 41642 | + | CGGCTGGATGTACCTGCACC | 844 | novel-miR-12 |
| t0004493 | SJC_S000283 | 212884 | 212903 | + | AGCGAAGACATCTGTAACCA | 839 | novel-miR-19 |
| t0004827 | SJC_S007757 | 7610 | 7629 | + | CTATCCTGAAGACCTTGGCT | 827 | novel-miR-5 |
| t0005267 | SJC_S000418 | 62471 | 62491 | − | CTGTCGGTCAAAAAGTGCTCT | 810 | novel-miR-16 |
| t0005533 | SJC_S002283 | 2741 | 2760 | + | GTCGTAAGCCAGAGTAGGAT | 800 | novel-miR-18 |
| t0005557 | SJC_S000059 | 843485 | 843505 | + | ACCACGGCCTACTGTAGGACT | 799 | novel-miR-3 |
| t0007711 | SJC_S000913 | 44846 | 44865 | + | TCGGCTTGTGTTCTTATTCC | 671 | novel-miR-10 |
| t0007806 | SJC_S001339 | 60022 | 60044 | + | GAACCGGACTGAGTTCGAATCCT | 660 | novel-miR-20 |
| t0008372 | SJC_S015651 | 593 | 612 | + | TACCGTTCGAACTAATCTAC | 557 | novel-miR-25 |
| t0008734 | SJC_S019902 | 653 | 675 | + | GAGATGATGATTGGAGTGATTGT | 416 | novel-miR-9 |
| T000027 | 9 | 16649791 | 16649813 | − | CAACGGAATCCCAAAAGCAGCTG | 4548 | Ocu-miR-191-5p |
*Only miRNAs with reads >100 were listed out.