Table 1.
haplotypes | n | 3 | 12 | 33 | 42 | 48 | 57 | 60 | 64 | 69 | 75 | 90 | 111 | 114 | 123 | 132 | 144 | 154 | 157 | 159 | 160 | 165 | 171 | 172 | 198 | 201 | 240 | 241 | 243 | 255 | 273 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Ais_cytb_n1 | 41 | A | A | T | T | G | T | C | G | G | G | G | C | T | C | T | T | T | C | G | G | G | T | A | A | T | C | C | G | A | T |
Ais_cytb_n2 | 40 | . | . | C | . | . | . | . | . | . | . | . | T | . | . | . | C | . | T | . | . | A | . | . | . | C | . | . | . | . | . |
Ais_cytb_n3 | 3 | . | . | C | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | . | . | A | . | . | . | C | . | . | . | . | . |
Ais_cytb_n4 | 3 | . | . | C | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | A | . | . | . | . | . | . | A | . | . |
Ais_cytb_n5 | 3 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | G | . |
Ais_cytb_n6 | 3 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | . | . | A | A | . | . | C | . | . | . | . | . |
Ais_cytb_n7 | 2 | . | . | C | . | . | . | . | . | . | . | . | T | . | . | . | C | . | T | . | . | A | . | . | . | . | . | . | . | . | . |
Ais_cytb_n8 | 1 | . | . | C | . | . | . | . | . | . | . | . | . | C | . | . | . | . | . | . | . | A | . | . | . | . | . | . | . | . | . |
Ais_cytb_d1 | 14 | G | . | . | C | A | C | . | A | A | A | T | . | . | T | C | C | C | G | A | A | . | . | G | G | . | T | T | . | . | C |
Ais_cytb_d2 | 1 | G | . | . | C | A | C | T | A | A | A | T | . | . | T | C | C | C | G | A | A | . | . | G | G | . | T | T | . | . | C |
Ais_cytb_d3 | 1 | G | . | . | G | A | C | . | A | A | A | T | . | . | T | C | C | C | G | A | A | . | . | G | G | . | T | T | . | . | C |
Ais_cytb_d4 | 1 | G | . | . | C | A | C | T | A | A | A | T | . | . | T | C | G | C | G | A | A | . | . | G | G | . | T | T | A | . | C |
Ais_cytb_d5 | 1 | G | . | . | C | A | C | . | A | A | A | A | . | . | T | C | C | C | G | A | A | . | . | G | G | . | T | T | . | . | C |
Ais_cytb_d6 | 1 | G | G | . | C | A | . | . | A | A | A | T | . | . | T | C | C | C | G | A | A | . | . | G | G | . | T | T | . | . | C |
Note.—Numbers indicate the position along the 274-bp fragment. Numbers in bold indicate the first codon positions, the others are the third codon positions. Nucleotides in bold induce amino acids changes on the predicted protein.