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. 2015 Oct 21;24(6):852–856. doi: 10.1038/ejhg.2015.223

Table 1. Primer pairs and amplicon information (see also Table 2 and Figure 1).

Primer pair sequence Amplicon information
1F: 5′-GATAGGTTGTATATGTTGGTG-3′ Minus-RT primers: 180 bp
1R: 5′-CTAAGATCAGTGCCACAA-3′  
2F: 5′-CAAACCGGACCTCACAGCAG-3′ (ex4) GFAP: α,β,γ: 789 bp; ζ: 1073 bp; Δ135: 654 bp; Δ164: 625 bp; Δex6: 568 bp; Δex7: 745 bp; X4: 909 bp
2R: 5′-CCGATGGAGCCTAGAGCAGCAA-3′ (3′-UTR ex9)  
3F: 5′-GGCTGCGGCTAGACCAACTCACTGC-3′ (ex1) GFAP: α,β: 919 bp
3R: 5′-TCCTTGTGCTCCTGCTTGGA-3′ (ex9)  
4F: 5′-CCTTCACTCCTCCTGTCATTCCA-3′ (5′-UTR ex2a) GFAP: γ: 1121 bp
4R: 5′-CCGATGGAGCCTAGAGCAGCAA-3′ (3′-UTR ex9)  
5F: 5′-GCAGTGAGTGTATGTTGGTGAAAGTG-3′ (5′-UTR ex2a) GFAP: γ: 344 bp
5R: 5′-GACGGGCTAAGGTGGCTTCA-3′ (ex3)  
6F: 5′-GGCTGGAGGAGGAGGGACAGAA-3′ (ex6) GFAP: δ/ɛ: 367 bp; κ: 739 bp
6R: 5′-GGGCCTGGTGAGGCTTGCT-3′ (3′-UTR ex7a/7b)  
7F: 5′-GCATCGCCCACCAGCACCT-3′ (promoter) GFAP: gDNA: 812 bp (ex 1)
7R: 5′-GGGTAAACAGAGGAGCCAAGGATCAC-3′ (in1)  
8F: 5′-CAAACCGGACCTCACAGCAG-3′ (ex4) GFAP: gDNA: 181 bp (GFAP variant c.719G>A detection assay)
8R: 5′-CCCACCCTTATTCCCTGATTCTC-3′ (in4)