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. 2016 May 10;4:e2004. doi: 10.7717/peerj.2004

Table 1. DNA yield measured by fluorescence-based method of quantification (SYBR Green I) represented by the mean ± SEM for ng of DNA per µg of Daphnia dry mass.

Missing values are due to salt precipitation from RNA later solution. Comparisons were made between the groups with same homogenisation method and with same extraction method. Same letters indicate the groups that differ statistically.

Preservation Extraction method Homogenisation method
Ceramic bead homogenisation Plastic pellet pestles Proteinase K digestion
Liquid Nitrogen Agencourt DNAdvance 5.40 ± 0.12a,b,d 4.10 ± 0.23c 2.77 ± 0.18d
CTAB method 3.13 ± 0.71b 3.52 ± 0.79c 2.29 ± 0.17
MasterPure DNA 5.45 ± 0.91a,b,e 3.10 ± 0.63e 2.93 ± 0.42e
ZR genomic DNA 1.65 ± 0.10a 1.26 ± 0.09c 0.97 ± 0.05
RNAlater solution Agencourt DNAdvance 4.07 ± 0.20 4.37 ± 0.08f 3.93 ± 0.20g
CTAB method 2.26 ± 0.03 4.13 ± 0.87f
MasterPure DNA
ZR genomic DNA 2.07 ± 0.16 1.52 ± 0.16f 0.97 ± 0.03g

Notes.

P-values are indicated accordantly.

a

p < 0.0001.

b

p < 0.05.

c

p < 0.05.

d

p < 0.01.

e

p < 0.05.

f

p < 0.01.

g

p < 0.01.