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. 2016 May 10;4:e1961. doi: 10.7717/peerj.1961

Table 1. Genomic characteristics of SlyHSF genes in tomato.

ID Name Chromosome Strand Start Stop No. Gene bases (bp) No. cDNA bases (bp) No. CDS bases (bp) No. Amino acids (aa)
SlyHSF-01 Solyc11g064990.1 SL2.40ch11 47389718 47391840 2,123 756 756 251
SlyHSF-02 Solyc08g005170.2 SL2.40ch08 111412 116839 5,428 1,949 1,584 527
SlyHSF-03 Solyc03g026020.2 SL2.40ch03 + 7810489 7812280 1,792 1,594 1,017 338
SlyHSF-04 Solyc03g097120.2 SL2.40ch03 52901766 52904929 3,164 1,874 1,476 491
SlyHSF-05 Solyc02g090820.2 SL2.40ch02 46880125 46883382 3,258 1,611 906 301
SlyHSF-06 Solyc09g065660.2 SL2.40ch09 + 59473864 59475995 2,132 1,405 1,119 372
SlyHSF-07 Solyc04g078770.2 SL2.40ch04 + 61036586 61037903 1,318 1,230 1,083 360
SlyHSF-08 Solyc06g072750.2 SL2.40ch06 + 41255352 41258348 2,997 1,613 1,449 482
SlyHSF-09 Solyc12g098520.1 SL2.40ch12 + 48549454 48552229 2,776 1,437 1,437 478
SlyHSF-10 Solyc08g080540.2 SL2.40ch08 60985869 60987278 1,410 1,329 978 325
SlyHSF-11 Solyc04g016000.2 SL2.40ch04 6594909 6598451 3,543 1,320 714 237
SlyHSF-12 Solyc12g007070.1 SL2.40ch11 50695058 50703526 8,469 1,110 1,110 369
SlyHSF-13 Solyc09g082670.2 SL2.40ch09 + 63781968 63784228 2,261 1,458 1,071 356
SlyHSF-14 Solyc06g053960.2 SL2.40ch06 33333411 33336335 2,925 892 429 142
SlyHSF-15 Solyc08g076590.2 SL2.40ch08 57710679 57714096 3,418 1,806 1,473 490
SlyHSF-16 Solyc09g059520.2 SL2.40ch09 50372011 50379351 7,341 1,551 1,170 389
SlyHSF-17 Solyc02g072000.2 SL2.40ch02 + 35903150 35904957 1,808 1,712 1,227 408
SlyHSF-18 Solyc08g062960.2 SL2.40ch08 49589145 49591151 2,007 1,215 1,056 351
SlyHSF-19 Solyc10g079380.1 SL2.40ch10 60125137 60126209 1,073 768 768 255
SlyHSF-20 Solyc03g006000.2 SL2.40ch03 + 678142 679948 1,807 1,693 1,206 401
SlyHSF-21 Solyc07g055710.2 SL2.40ch07 60972388 60973952 1,565 1,477 1,167 388
SlyHSF-22 Solyc07g040680.2 SL2.40ch07 + 46702761 46704429 1,669 1,435 1,071 356
SlyHSF-23 Solyc02g078340.2 SL2.40ch02 + 37643661 37646059 2,399 666 618 205
SlyHSF-24 Solyc09g009100.2 SL2.40ch09 2445341 2448016 2,676 1,959 1,530 509
SlyHSF-25 Solyc02g079180.1 SL2.40ch02 + 38360060 38365669 5,610 1,245 1,245 414
SlyHSF-26 Solyc02g072060.1 SL2.40ch02 + 35912808 35914648 1,841 1,020 1,020 339