Table 1. Genomic characteristics of SlyHSF genes in tomato.
ID | Name | Chromosome | Strand | Start | Stop | No. Gene bases (bp) | No. cDNA bases (bp) | No. CDS bases (bp) | No. Amino acids (aa) |
---|---|---|---|---|---|---|---|---|---|
SlyHSF-01 | Solyc11g064990.1 | SL2.40ch11 | − | 47389718 | 47391840 | 2,123 | 756 | 756 | 251 |
SlyHSF-02 | Solyc08g005170.2 | SL2.40ch08 | − | 111412 | 116839 | 5,428 | 1,949 | 1,584 | 527 |
SlyHSF-03 | Solyc03g026020.2 | SL2.40ch03 | + | 7810489 | 7812280 | 1,792 | 1,594 | 1,017 | 338 |
SlyHSF-04 | Solyc03g097120.2 | SL2.40ch03 | − | 52901766 | 52904929 | 3,164 | 1,874 | 1,476 | 491 |
SlyHSF-05 | Solyc02g090820.2 | SL2.40ch02 | − | 46880125 | 46883382 | 3,258 | 1,611 | 906 | 301 |
SlyHSF-06 | Solyc09g065660.2 | SL2.40ch09 | + | 59473864 | 59475995 | 2,132 | 1,405 | 1,119 | 372 |
SlyHSF-07 | Solyc04g078770.2 | SL2.40ch04 | + | 61036586 | 61037903 | 1,318 | 1,230 | 1,083 | 360 |
SlyHSF-08 | Solyc06g072750.2 | SL2.40ch06 | + | 41255352 | 41258348 | 2,997 | 1,613 | 1,449 | 482 |
SlyHSF-09 | Solyc12g098520.1 | SL2.40ch12 | + | 48549454 | 48552229 | 2,776 | 1,437 | 1,437 | 478 |
SlyHSF-10 | Solyc08g080540.2 | SL2.40ch08 | − | 60985869 | 60987278 | 1,410 | 1,329 | 978 | 325 |
SlyHSF-11 | Solyc04g016000.2 | SL2.40ch04 | − | 6594909 | 6598451 | 3,543 | 1,320 | 714 | 237 |
SlyHSF-12 | Solyc12g007070.1 | SL2.40ch11 | − | 50695058 | 50703526 | 8,469 | 1,110 | 1,110 | 369 |
SlyHSF-13 | Solyc09g082670.2 | SL2.40ch09 | + | 63781968 | 63784228 | 2,261 | 1,458 | 1,071 | 356 |
SlyHSF-14 | Solyc06g053960.2 | SL2.40ch06 | − | 33333411 | 33336335 | 2,925 | 892 | 429 | 142 |
SlyHSF-15 | Solyc08g076590.2 | SL2.40ch08 | − | 57710679 | 57714096 | 3,418 | 1,806 | 1,473 | 490 |
SlyHSF-16 | Solyc09g059520.2 | SL2.40ch09 | − | 50372011 | 50379351 | 7,341 | 1,551 | 1,170 | 389 |
SlyHSF-17 | Solyc02g072000.2 | SL2.40ch02 | + | 35903150 | 35904957 | 1,808 | 1,712 | 1,227 | 408 |
SlyHSF-18 | Solyc08g062960.2 | SL2.40ch08 | − | 49589145 | 49591151 | 2,007 | 1,215 | 1,056 | 351 |
SlyHSF-19 | Solyc10g079380.1 | SL2.40ch10 | − | 60125137 | 60126209 | 1,073 | 768 | 768 | 255 |
SlyHSF-20 | Solyc03g006000.2 | SL2.40ch03 | + | 678142 | 679948 | 1,807 | 1,693 | 1,206 | 401 |
SlyHSF-21 | Solyc07g055710.2 | SL2.40ch07 | − | 60972388 | 60973952 | 1,565 | 1,477 | 1,167 | 388 |
SlyHSF-22 | Solyc07g040680.2 | SL2.40ch07 | + | 46702761 | 46704429 | 1,669 | 1,435 | 1,071 | 356 |
SlyHSF-23 | Solyc02g078340.2 | SL2.40ch02 | + | 37643661 | 37646059 | 2,399 | 666 | 618 | 205 |
SlyHSF-24 | Solyc09g009100.2 | SL2.40ch09 | − | 2445341 | 2448016 | 2,676 | 1,959 | 1,530 | 509 |
SlyHSF-25 | Solyc02g079180.1 | SL2.40ch02 | + | 38360060 | 38365669 | 5,610 | 1,245 | 1,245 | 414 |
SlyHSF-26 | Solyc02g072060.1 | SL2.40ch02 | + | 35912808 | 35914648 | 1,841 | 1,020 | 1,020 | 339 |