Table 3. qRT PCR of DNA repair related genes in the dr0997 mutant relative to wild-type R1 with or without gamma treatment.
| Locus | Annotation | Fold change (±SD) | |
|---|---|---|---|
| γ free | γ treatment | ||
| Δ0997(-γ)/R1(-γ) | Δ0997(+γ)/R1(+γ) | ||
| DR1477 | DNA repair protein RecN | -3.46 (±0.32) | -2.38 (±0.03) |
| DRA0346 | DNA damage repair protein PprA | -2.79 (±0.29) | -1.77 (±0.19) |
| DR1819 | putative UV damage endonuclease UvsE | -5.19 (±0.45) | -1.36 (±0.17) |
| DR1771 | excinuclease ABC subunit A UvrA | -1.11 (±0.30) | 0.81 (±0.06) |
| DR2275 | excinuclease ABC subunit B UvrB | -3.21 (±0.39) | -1.87 (±0.21) |
| DR1354 | excinuclease ABC subunit C UvrC | -5.95 (±0.53) | -2.99 (±0.31) |
| DR1274 | Holliday junction DNA helicase RuvA | -1.13 (±0.02) | -0.93 (±0.13) |
| DR0596 | Holliday junction DNA helicase RuvB | -1.09 (±0.06) | 0.98 (±0.09) |
| DR0440 | crossover junction endodeoxyribonuclease RuvC | -7.54 (±0.98) | -4.57 (±0.83) |
| DR0400 | cell division protein FtsK | -1.36 (±0.12) | -1.35 (±0.09) |
| DR1916 | ATP-dependent DNA helicase RecG | -2.68 (±0.16) | -2.78 (±0.09) |
| DR2340 | recombination protein RecA | -15.56 (±0.75) | -8.27 (±0.39) |
| DR2606 | primosome assembly protein PriA | -2.58 (±0.38) | -2.57 (±0.11) |
| DR2418 | DNA-binding response regulator DrRRA | -1.61 (±0.04) | -1.81(±0.02) |
| DR0167 | Radiation response protein PprI | -1.50 (±0.63) | -1.05 (±0.02) |
| DR0003 | tellurite resistance protein TerB | -14.59 (±1.32) | -11.08 (±1.24) |
| DR0070 | radiation induced single-stranded DdrB | -6.35 (±0.27) | -2.06 (±0.14) |
| DR1440 | cation-transporting ATPase | 0.86 (±0.07) | -5.68 (±0.35) |
| DR2574 | XRE family transcriptional regulator DdrO | -3.82 (±0.25) | -1.00 (±0.03) |
| DR0326 | radiation-induced protein | -7.13 (±0.65) | -2.19 (±0.14) |
| DR1126 | single-stranded-DNA-specific exonuclease | -2.02 (±0.16) | -3.25 (±0.56) |
| DR1089 | DNA replication and repair protein RecF | -4.81 (±0.15) | -2.11 (±0.03) |
| DR0819 | DNA replication and repair protein RecO | -2.64 (±0.05) | 0.94 (±0.01) |
| DR0198 | DNA replication and repair protein RecR | 0.78 (±0.06) | 0.76 (±0.02) |
Functional annotation is based on KEGG (http://www.genome.jp/kegg/).