Option	Method	Description
A	Single docking experiment with AutoDock Vina	Basic docking method for study of a single ligand with a single receptor
B	Single docking experiment with AutoDock	Basic docking method for study of a single ligand with a single receptor, with explicit calculation of affinity maps.
C	Virtual Screening with Raccoon2 and AutoDock Vina	Virtual screen of a library of ligands with a single receptor, often used for drug discovery
D	AutoDock Vina with Flexible Side Chains	Docking method for a single ligand with a single receptor, incorporating limited receptor flexibility
E	Active Site Prediction with AutoLigand	Method for analysis of receptor binding sites, for prediction of drugable sites
F	Docking with Explicit Waters	Advanced docking method for a single ligand with a single receptor incorporating explicit bridging water molecules