Table 1. Statistics of the Phalaenopsis draft genome.
Estimate of genome size | 3.45 Gb |
Chromosome number (2n) | 38 |
Total size of assembled contigs | 3.1 Gb |
Number of contigs (≥ 1 kbp) | 630,316 |
Largest contig | 50,944 |
N50 length (contig) | 1,489 |
Number of scaffolds (≥ 1 kbp) | 149,151 |
Total size of assembled scaffolds | 3,104,268,398 |
N50 length (scaffolds) | 100,943 |
Longest scaffold | 1,402,447 |
GC content | 30.7 |
Number of gene models | 41,153 |
Mean coding sequence length | 1,014 bp |
Mean exon length/number | 264 bp/3.83 |
Mean intron length/number | 3,099 bp/2.83 |
Exon GC (%) | 41.9 |
Intron GC (%) | 16.1 |
Number of predicted miRNA genes | 650 |
Total size of transposable elements | 1,598,926,178 |