Table 3.

Types and numbers of large effect SNPs identified between Four-row Wax and B73 maize.

Types	Total number	Inducing premature stop codons	Abolishing stop codons	Altering initiation Met	Altering splice sites	Essential splice sites	Changing properties of amino acids
Non-synonymous of total SNPs	71,198	2,617 (3.68%)	681 (0.96%)	298 (0.42%)	2,769 (3.89%)	718 (1.01%)	48,523 (68.15%)
Non-synonymous of novel SNPs	23,590	1,129 (4.79%)	187 (0.79%)	76 (0.32%)	952 (4.04%)	358 (1.52%)	14,465 (61.32%)