Table 2.
List of manually curated transporter genes and functions in unambiguous function group.
| Name of transporter gene | TCID | Name of transporter function∗ |
|---|---|---|
| Class 1: channels and pores | ||
|
| ||
| AO090023000569 | 1.A.1.7.1 | Outward-rectifier potassium channel |
| AO090038000314 | 1.A.11.3.2 | Ammonium transporter |
| AO090003001402 | 1.A.35 | Magnesium transporter |
| AO090120000141 | 1.A.35.5.1 | Magnesium transporter |
| AO090120000214 | 1.A.56.1.4 | Copper transporter |
| AO090011000329 | 1.A.8.8.8 | Aquaporin |
| AO090023000895 | 1.B.8.1.1 | Voltage-dependent anion channel porin |
|
| ||
| Class 2: electrochemical potential-driven transporters | ||
|
| ||
| AO090003000050 | 2.A.1.7.1 | L-fucose permease |
| AO090012000623 | 2.A.1.8.5 | Nitrate transporter |
| AO090010000135 | 2.A.100.1.3 | Iron-regulated transporter |
| AO090010000229 | 2.A.17.2.2 | Proton-dependent oligopeptide transporter |
| AO090026000828 | 2.A.19.4.4 | Sodium/potassium/calcium exchanger |
| AO090009000637 | 2.A.2.6.1 | Alpha-glucoside permease |
| AO090003001404 | 2.A.20 | Phosphate transporter |
| AO090012000901 | 2.A.20.2.2 | Phosphate transporter |
| AO090103000274 | 2.A.22.3.2 | Sodium and chloride dependent GABA transporter |
| AO090009000405 | 2.A.29.1.3 | Mitochondrial adenine nucleotide translocator |
| AO090005000114 | 2.A.3.10.2 | Amino acid transporter |
| AO090009000636 | 2.A.36.1.12 | Sodium/hydrogen exchanger |
| AO090005000019 | 2.A.39.3.1 | Allantoin permease |
| AO090005000455 | 2.A.40.5.1 | Purine permease |
| AO090003000443 | 2.A.41.2.7 | H+/nucleoside cotransporter |
| AO090003000920 | 2.A.47.2.2 | Phosphate transporter |
| AO090026000432 | 2.A.49.1.3 | Chloride channel |
| AO090005000026 | 2.A.5.1.1 | Zinc transporter |
| AO090011000831 | 2.A.5.5.1 | Zinc transporter |
| AO090026000441 | 2.A.5.7.1 | Zinc transporter |
| AO090011000817 | 2.A.52.1.3 | Nickel transporter |
| AO090003000798 | 2.A.53.1.2 | Sodium-independent sulfate anion transporter |
| AO090003001119 | 2.A.55.1.1 | High-affinity metal uptake transporter |
| AO090003001233 | 2.A.57.3.1 | Nucleoside transporter |
| AO090005001332 | 2.A.59.1.1 | Arsenite transporter |
| AO090120000217 | 2.A.6.6.5 | Hydroxymethylglutaryl-CoA reductase |
| AO09M000000016 | 2.A.63 | NADH-ubiquinone oxidoreductase |
| AO090001000748 | 2.A.66 | Polysaccharide exporter |
| AO090010000775 | 2.A.7.10.2 | UDP-xylose/UDP-N-acetylglucosamine transporter |
| AO090009000400 | 2.A.7.11.1 | UDP-galactose transporter |
| AO090009000688 | 2.A.7.13.2 | GDP-mannose transporter |
| AO090026000255 | 2.A.72.3.2 | Potassium transporter |
| AO090005001455 | 2.A.97.1.4 | Potassium and hydrogen ion antiporter |
|
| ||
| Class 3: primary active transporters | ||
|
| ||
| AO090009000651 | 3.A.1.201.11 | Multidrug resistance protein 1 |
| AO090038000399 | 3.A.1.31.1 | Possible ABC transporter permease for cobalt |
| AO090003000688 | 3.A.19.1.1 | Arsenite-translocating ATPase |
| AO090010000482 | 3.A.2 | V-type ATPases |
| AO09M000000001 | 3.A.2.1.3 | F-type ATPase |
| AO090012000797 | 3.A.2.2.3 | V-type ATPase |
| AO090038000088 | 3.A.3.1.7 | P-type ATPase |
| AO090012000773 | 3.A.3.10.1 | P-type ATPase |
| AO090038000322 | 3.A.3.2.2 | P-type ATPase |
| AO090005000842 | 3.A.3.3.6 | Plasma membrane proton ATPase |
| AO09M000000013 | 3.D.1.2.1 | NADH dehydrogenase |
| AO09M000000015 | 3.D.1.6.2 | NADH-ubiquinone oxidoreductase |
| AO090102001037 | 3.D.2.4.1 | Proton-translocating transhydrogenase |
| AO090010000475 | 3.D.3.2.1 | Cytochrome b-c1 complex subunit Rieske |
| AO09M000000014 | 3.D.4.8.1 | Cytochrome oxidase |
∗Names of transporter functions are based on KEGG, PFAM, and UniProt databases.