Table 1.
Unique polymorphic sites that distinguish mtDNA haplotypes A to E
| Reference sequence (Accession: AJ002189.1) position | Haplotype A (Accession: KT279758) | Haplotype B (Accession: KT261429) | Haplotype C (Accession: KT279759) | Haplotype D (Accession: KT279760) | Haplotype E (Accession: KT261430) | Overlapping gene | ETC complex | Amino acid change |
|---|---|---|---|---|---|---|---|---|
| 2309 | 2309 insT | 16S rRNA | ||||||
| 2312 | 2312 C > T | 16S rRNA | ||||||
| 3060 | 3060 C > T | NADH1 | I | |||||
| 4179 | 4179 T > C | NADH2 | I | |||||
| 4897 | 4897 A > G | NADH2 | I |
CAA05230.1:p. Ile330Val |
||||
| 5585 | 5585 G > A | COI | IV | |||||
| 6053 | 6053 C > T | COI | IV | |||||
| 6212 | 6212 C > T | COI | IV | |||||
| 6359 | 6359 G > A | COI | IV | |||||
| 6879 | 6879 G > A | |||||||
| 7430 | 7430 A > G | COII | IV | |||||
| 8116 | 8116 A > G | ATPase 6 | V |
CAA05234.1:p.I le58Met |
||||
| 9758 | 9758 C > A | NADH3 | I |
CAA05236.1:p. Leu95Ile |
||||
| 10283 | 10283 T > C | NADH4 | I | |||||
| 10629 | 10629 C > T | NADH4 | I | |||||
| 12216 | 12216 G > C | NADH5 | I | |||||
| 13424 | 13424 T > C | NADH5 | I |
CAA05241.1:p. Ile556Thr |
||||
| 13529 | 13529 T > C | NADH5 | I |
CAA05241.1:p. Ser591Phe |
||||
| 13898 | 13898 C > T | NADH6 | I |
CAA05238.1:p. Met64Ile |
||||
| 14378 | 14378 C > T | CYTB | III | |||||
| 14594 | 14594 G > A | CYTB | III | |||||
| 15212 | 15212 C > T | CYTB | III | |||||
| 15615 | 15615 C > T | D-loop | ||||||
| 15675 | 15675 T > C | D-loop | ||||||
| 15758 | 15758 T > C | D-loop | ||||||
| 15840 | 15840 T > C | D-loop | ||||||
| 15936 | 15936 A > G | D-loop | ||||||
| 16127 | 16127 G > A | D-loop |