Table 1. Top 20 genes with one peak of expression during chicken somitogenesis.
Times in minutes, assuming a 90mn periodicity, are provided for each peak. Accuracy has been estimated using a Monte Carlo method. All experimentally validated cyclic genes were detected using our algorithm (see [15]).
| Probe set ID | Gene | Time(min) | LS p-value |
|---|---|---|---|
| Gga.3180.1.S2_a_at | LFNG | 78±5 | 0.00345 |
| Gga.3754.2.S1_at | HES1 | 72±4 | 0.00442 |
| Gga.11242.1.S1_at | HES5 | 78±6 | 0.00477 |
| GgaAffx.23401.4.S1_s_at | DOCK7 | 87±6 | 0.00531 |
| Gga.14954.1.S1_at | NAALADL2 | 75±8 | 0.00615 |
| GgaAffx.7254.1.S1_at | AZI2 | 77±4 | 0.00704 |
| GgaAffx.22378.1.S1_s_at | PLCG2 | 75±6 | 0.00712 |
| Gga.3772.1.S1_a_at | T | 49±2 | 0.00737 |
| Gga.6311.1.S1_at | HEY1 | 70±3 | 0.02147 |
| Gga.329.1.S1_at | HAS2 | 40±3 | 0.0198 |
| Gga.13220.1.S1_at | DUSP22 | 9±3 | 0.02493 |
| Gga.2701.1.S2_at | FGF3 | 76±7 | 0.02595 |
| Gga.12366.1.S1_at | NUP37 | 75±5 | 0.02417 |
| GgaAffx.23741.1.S1_at | DACT1 | 81±6 | 0.0218 |
| GgaAffx.25111.1.S1_s_at | IPO5 | 78±1 | 0.02073 |
| Gga.4283.1.S1_at | CTNNB1 | 51±3 | 0.02377 |
| Gga.892.1.S1_at | ID1 | 67±1 | 0.03083 |
| Gga.8363.1.S2_at | AXIN2 | 21±8 | 0.03148 |
| Gga.8082.1.A1_at | RBM45 | 22±7 | 0.03127 |
| Gga.2170.1.S1_at | GRB2 | 51±8 | 0.04218 |