Table 2. Top 20 genes with one peak of expression during zebrafish somitogenesis.
Times in minutes, assuming a 30mn periodicity, are provided for each peak. Accuracy has been estimated using a Monte Carlo method. All experimentally validated cyclic genes were detected using our algorithm (see [15]).
| Probe set ID | Gene | Time(min) | LS p-value |
|---|---|---|---|
| Dr.8086.1.S1_s_at | dlc | 17±1 | 0.0009 |
| Dr.5372.1.S1_x_at | her4.2 | 25±1 | 0.0014 |
| Dr.3696.1.S1_at | her7 | 24±1 | 0.0023 |
| Dr.24815.2.S1_at | rps29 | 14±4 | 0.0024 |
| Dr.11157.1.S1_at | LOC100003640 | 25±2 | 0.0039 |
| Dr.1462.1.S1_at | her1 | 16±1 | 0.0044 |
| Dr.5759.1.A1_at | hoxd11a | 6±2 | 0.0053 |
| Dr.1899.1.S1_at | her15.1 | 24±1 | 0.0058 |
| Dr.4733.1.A1_at | spty2d1 | 2±1 | 0.0063 |
| Dr.7852.1.S1_at | utp11l | 28±4 | 0.0072 |
| Dr.8835.2.S1_at | mphosph8 | 13±4 | 0.008 |
| Dr.1410.1.S1_at | prrx1a | 29±5 | 0.0083 |
| Dr.4295.1.S1_at | rfc4 | 10±3 | 0.0087 |
| Dr.17281.1.A1_at | zgc:152990 | 18±4 | 0.0097 |
| Dr.1460.1.S1_at | her2 | 27±2 | 0.0106 |
| Dr.12851.1.S1_at | mrpl40 | 24±9 | 0.0109 |
| Dr.14998.2.S1_at | ech1 | 28±6 | 0.0111 |
| Dr.14781.1.S1_at | ubxn7 | 14±3 | 0.012 |
| Dr.17394.1.A1_at | lmf2b | 18±7 | 0.0129 |
| Dr.13969.1.A1_at | nipa2 | 14±3 | 0.0129 |