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. 2016 Feb 8;7(4):443–455. doi: 10.1080/21505594.2016.1145335

Table 1.

Expression level of genes involved in pili formation detected in planktonic and biofilm-associated cells of the MAR002 strain, assessed by qRT-PCR.

      Gene expression level
Gene code in MAR002 (JRHB01000001/2 and NZ_JRHB01000001/2) Gene code in ATCC 17978 (CP000521.1) Putative functions in ATCC 17978 Exponential planktonic cells Biofilm-associated cells
LH92_03275 LH92_RS03235 A1S_0690 FilA 0,0022 ± 0,0009 0,0022 ± 0,0008
LH92_03820 LH92_RS03765 A1S_3569 Hypothetical protein 0,0013 ± 0,0002 0,0033 ± 0,0011
LH92_07655 LH92_RS07535 A1S_1507 Fimbrial protein 0,0002 ± 0,00005 0,0038 ± 0,0028
LH92_07670 LH92_RS07550 A1S_1510 Fimbrial protein 0,1863 ± 0,0958 0,8259 ± 0,1918
LH92_ 08970 LH92_RS08835 Not found 0,3566 ± 0,0633 0,6948 ± 0,0647
LH92_08985 LH92_RS08850 Not found 0,0198 ± 0,0035 0,0816 ± 0,0105
LH92_11070 LH92_RS10905 A1S_2088 Hypothetical protein 0,0016 ± 0,0005 0,0054 ± 0,0005
LH92_11085 LH92_RS10920 A1S_2091 Putative exported protein 0,1083 ± 0,0108 2,7051 ± 0,5923
LH92_11710 LH92_RS11540 A1S_2218 CsuA/B 0,4429 ± 0,0770 0,1485 ± 0,0189
LH92_16105 LH92_RS15875 A1S_3167 PilY1 0,0979 ± 0,0169 0,1410 ± 0,0552
LH92_16175 LH92_RS15945 A1S_3177 Fimbrial protein 0,1158 ± 0,0618 0,0697 ± 0,0068