Table 3. DNA intercalation kinetics parameters for unconventional intercalators investigated by single-molecule force spectroscopy.
Complex | Single-step DNA intercalation | |||||||
---|---|---|---|---|---|---|---|---|
xon (nm) | xoff (nm) | ka(0) (M−1s−1) × 104 | koff(0) (s−1) × 10−3 | |||||
ActD | 0.33 ± 0.02 | 0.11 ± 0.01 | 0.1(±0.02) | 1.0(±0.2) | ||||
(Δ,Δ-P)4+ | 0.33 ± 0.02 | 0.14 ± 0.01 | 1 (±0.01) | 1.4(±0.1) | ||||
Double-step DNA intercalation | ||||||||
x+1 (nm) | x+2 (nm) | x−1 (nm) | x−2 (nm) | k+1(0) (M−1s−1) × 106 | k+2(0) (s−1) × 10−3 | k−1(0) (s−1) × 10−3 | k−2(0) (s−1) × 10−3 | |
(Δ,Δ-Pc)4+ | 0.19 ± 0.02 | 0.08 ± 0.01 | −0.06 ± 0.01 | −0.15 ± 0.03 | 1.8 ± 0.4 | 5.8 ± 1.0 | 68 ± 4 | 3.6 ± 1.0 |