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. 2016 Apr 11;44(9):4067–4079. doi: 10.1093/nar/gkw238

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© The Author(s) 2016. Published by Oxford University Press on behalf of Nucleic Acids Research.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

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Figure 2. — Chromatin accessibility revealed by MNase-Seq. (A) MNase digestion of chromatin and single nucleosome-bound DNA fragments (∼150 bp) were excised for sequencing. (B) The relative chromatin accessibility in pericentromeric regions of chromosomes. Each pericentromeric region was divided into 100 kb windows. The number of MNase-Seq reads for each window was compared with genome coverage of the control sample. (C) Relative chromatin accessibility of long TEs (>4 kb). (D) Relative chromatin accessibility of hypermethylated regions in CHH context between fibres at 10 DPA and ovules at 0 DPA, between fibres at 20 DPA and fibres at 10 DPA, and between fibres at 30 DPA and fibres at 20 DPA (**P-value < 0.001).