Table 1. Genetic variation of SSR marker loci (heterozygosity) and virulence factors (Nei’s diversity) and Hardy-Weinberg equilibrium (HWE) tests for non-random association (p value in parenthesis) in the seven P. infestans populations each composed of 20 genetically distinct isolates sampled from China.
Population | Sample size | SSR | Virulence factor | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Obs. | Exp. | HWE | avr1 | avr2 | avr3a | avr4 | avr5 | avr6 | avr7 | avr8 | avr9 | avr10 | avr11 | Mean | ||
Fuzhou | 20 | 0.724 | 0.450 | 0.000 | 0.255 | 0.095 | 0.480 | 0.480 | 0.000 | 0.480 | 0.455 | 0.420 | 0.095 | 0.320 | 0.000 | 0.280 |
Gansu | 20 | 0.725 | 0.483 | 0.000 | 0.480 | 0.480 | 0.095 | 0.375 | 0.495 | 0.480 | 0.180 | 0.255 | 0.420 | 0.420 | 0.480 | 0.378 |
Guangxi | 20 | 0.735 | 0.446 | 0.000 | 0.095 | 0.255 | 0.375 | 0.480 | 0.255 | 0.375 | 0.320 | 0.495 | 0.375 | 0.375 | 0.255 | 0.332 |
Guizhou | 20 | 0.734 | 0.411 | 0.000 | 0.495 | 0.480 | 0.180 | 0.255 | 0.480 | 0.420 | 0.180 | 0.180 | 0.500 | 0.180 | 0.480 | 0.348 |
Ningxia | 20 | 0.743 | 0.396 | 0.000 | 0.500 | 0.500 | 0.000 | 0.095 | 0.480 | 0.180 | 0.000 | 0.095 | 0.495 | 0.375 | 0.500 | 0.292 |
Xiapu | 20 | 0.863 | 0.498 | 0.001 | 0.375 | 0.455 | 0.320 | 0.455 | 0.375 | 0.455 | 0.420 | 0.480 | 0.095 | 0.255 | 0.255 | 0.358 |
Yunnan | 20 | 0.750 | 0.487 | 0.000 | 0.480 | 0.420 | 0.375 | 0.455 | 0.495 | 0.420 | 0.420 | 0.320 | 0.420 | 0.455 | 0.375 | 0.421 |
Pooled | 140 | 0.748 | 0.457 | 0.000 | 0.474 | 0.446 | 0.293 | 0.446 | 0.420 | 0.493 | 0.311 | 0.426 | 0.408 | 0.500 | 0.389 |