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. 2016 May 19;7:737. doi: 10.3389/fmicb.2016.00737

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Copyright © 2016 Domik, Thürmer, Weise, Brandt, Daniel and Piechulla.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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The phylogenetic tree of SOD_c20750 homologs (terpene cyclase) in different bacterial species and isolates. The tree was calculated using phylogeny.fr (Dereeper et al., 2008) based on the protein sequences of the SOD_c20750 of Serratia plymuthica 4Rx13. The protein sequences of the S. plymuthica isolates AS9, AS12, AS13, A30, V4, and S13 were aligned to the sequence of 4Rx13. Streptomyces tsukubaensis, Streptomyces pratensis, Pseudomonas chlororaphis, Pseudomonas agrici, and Burkholderia pyrrocinia were selected as outgroups. The tree was built on the basis of the approximation of the standard Likelihood Ratio Test (aLRT). Numbers indicate branch support values.