Skip to main content
. 2016 Feb 2;7(6):6379–6397. doi: 10.18632/oncotarget.7142

Table 1. Oligonucleotide sequence for shRNAs, qRT-PCR, and ChIP.

Oligonucleotide sequence of shRNAs
shPRDX2 5′ CCTTCGCCAGATCACTGTTAA 3′
shPRDX4 5′ CCACACTCTTAGAGGTCTCTT 3′
shHIF-1α 5′ TGCTCTTTGTGGTTGGATCTA 3′
shHIF-2α 5′ GGAGACGGAGGTGTTCTATT 3′
Primers used in qRT-PCR assays
PRDX2 Fw:5′ GAAGCTGTCGGACTACAAAGG 3′
Rev: 5′ TCGGTGGGGCACACAAAAG 3′
PRDX4 Fw: 5′ AGAGGAGTGCCACTTCTACG 3′
Rev: 5′ GGAAATCTTCGCTTTGCTTAGGT 3′
HGF Fw: 5′ GCTATCGGGGTAAAGACCTACA 3′
Rev: 5′ CGTAGCGTACCTCTGGATTGC 3′
GPI Fw: 5′ CCGCGTCTGGTATGTCTCC 3′
Rev: 5′ CCTGGGTAGTAAAGGTCTTGGA 3′
SLC2A3 Fw: 5′ GCTGGGCATCGTTGTTGGA 3′
Rev: 5′ GCACTTTGTAGGATAGCAGGAAG 3′
PDK3 Fw: 5′ CGCTCTCCATCAAACAATTCCT 3′
Rev: 5′ CCACTGAAGGGCGGTTAAGTA 3′
CA9 Fw: 5′ GGATCTACCTACTGTTGAGGCT 3′
Rev: 5′ CATAGCGCCAATGACTCTGGT 3′
PGK1 Fw: 5′ TGGACGTTAAAGGGAAGCGG 3′
Rev: 5′ GCTCATAAGGACTACCGACTTGG 3′
18S rRNA Fw: 5′ CGGCGACGACCCATTCGAAC 3′
Rev: 5′ GAATCGAACCCTGATTCCCCGTC 3′
Primers used in ChIP assays
SLC2A3 HRE Fw: 5′ TCAAGTCTTCAAGAAAGATCTAGG 3′
Rev: 5′ GACCCAGAGATGCTGTAATG 3′
PGK1 HRE Fw: 5′ TCTCGCACATTCTTCACGTCCGTT 3′
Rev: 5′ TAGTGAGACGTGCGGCTTCCGTTT 3′
PRDX2 HRE Fw: 5′ CGTGCACGTCTTGGTTC 3′
Rev: 5′ CTAGACGCACGGACGAT 3′