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. 2016 May 19;11(5):e0156020. doi: 10.1371/journal.pone.0156020

Table 1. Results obtained using MLST for 76 S. sonnei isolates from Guizhou Province.

Strain No. Isolates Name Alle profiles ST
arcA aroE aspC clpX cyaA dNaG fadD grpE icdA lysP mdh mtlD mutS rpoS uidA
S01 1974GZ01 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S02 1978GZ02 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S03 1978GZ04 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S04 1982GZ05 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S05 2008GZ04 9 13 18 19 13 3 18 3 21 14 23 13 17 17 1 122
S07 2009GZ10 9 13 18 19 13 3 18 3 21 14 23 13 17 68 1 116
S08 2009GZ11 9 13 18 19 13 3 18 3 21 14 23 13 17 68 1 116
S09 2009GZ12 9 13 18 19 13 3 18 3 21 14 23 13 17 68 1 116
S10 2009GZ13 9 13 10 19 13 3 18 3 21 14 23 13 17 68 1 140
S11 2009GZ14 9 13 18 19 13 3 18 3 21 14 23 13 17 68 1 116
S12 2009GZ16 9 13 18 19 13 3 18 3 21 14 23 13 17 68 1 116
S13 2009GZ17 9 13 18 19 13 3 18 3 21 14 23 13 17 68 1 116
S14 2009GZ18 9 13 18 19 13 3 18 3 21 14 23 13 17 68 1 116
S15 2009GZ19 9 13 4 19 13 3 18 3 21 14 23 13 17 68 1 123
S16 2009GZ20 9 13 4 19 13 3 18 3 21 14 23 13 17 68 1 123
S17 2009GZ21 9 13 18 19 13 3 18 3 21 14 23 13 17 68 1 116
S18 2009GZ22 9 13 18 19 13 3 18 3 21 14 23 13 17 68 1 116
S19 2009GZ24 9 13 18 19 13 3 18 3 21 14 23 13 17 68 1 116
S20 2009GZ26 9 13 18 19 13 3 18 3 21 14 23 13 17 68 1 116
S21 2009GZ27 9 13 18 19 13 3 18 3 21 14 23 13 17 68 1 116
S22 2009GZ30 9 13 18 19 13 3 18 3 21 14 23 13 17 68 1 116
S23 2009GZ31 9 13 18 19 13 3 18 3 21 14 23 13 17 68 1 116
S24 2009GZ32 9 13 18 19 13 3 18 3 21 14 23 13 17 68 1 116
S25 2009GZ33 9 13 18 19 13 3 18 3 21 14 23 13 17 68 1 116
S26 2009GZ34 9 13 18 19 13 3 18 3 21 14 23 13 17 68 1 116
S27 2009GZ35 9 13 18 19 13 3 18 3 21 14 23 13 17 68 1 116
S28 2009GZ37 9 13 18 19 13 3 18 3 21 14 23 13 17 68 1 116
S29 2009GZ38 9 13 171 19 13 3 18 3 21 14 23 13 17 68 1 141
S30 2009GZ39 9 13 18 19 13 3 18 3 21 14 23 13 17 68 1 116
S31 2009GZ41 9 13 18 19 13 3 18 3 21 14 23 13 17 68 1 116
S32 2009GZ42 9 13 18 19 13 3 18 3 21 14 23 13 17 68 1 116
S33 2009GZ43 9 13 18 19 13 3 18 3 21 14 23 13 17 68 1 116
S34 2009GZ44 9 13 171 19 13 3 18 3 21 14 23 13 17 68 1 141
S35 2009GZ45 9 13 18 19 13 3 18 3 21 14 23 13 17 68 1 116
S36 2009GZ46 9 13 171 19 13 3 18 3 21 14 23 13 17 68 1 141
S37 2009GZ47 9 13 18 19 13 3 18 3 21 14 23 13 17 68 1 116
S38 2009GZ48 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S39 2009GZ49 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S40 2009GZ50 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S41 2009GZ51 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S42 2009GZ53 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S43 2009GZ54 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S44 2009GZ55 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S45 2009GZ56 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S46 2009GZ57 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S47 2009GZ58 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S48 2009GZ59 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S49 2009GZ61 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S50 2009GZ62 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S51 2009GZ63 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S52 2009GZ64 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S53 2009GZ65 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S54 2009GZ66 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S55 2009GZ69 9 13 18 19 13 3 18 3 21 14 23 13 17 17 1 122
S56 2010GZ07 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S57 2010GZ08 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S58 2010GZ09 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S59 2010GZ10 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S60 2010GZ11 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S61 2010GZ12 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S62 2010GZ13 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S63 2010GZ14 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S64 2010GZ15 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S65 2010GZ16 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S66 2010GZ17 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S67 2010GZ18 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S68 2010GZ19 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S69 2010GZ20 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S70 2010GZ21 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S71 2010GZ22 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S72 2010GZ23 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S73 2010GZ24 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S74 2010GZ25 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S75 2010GZ26 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S76 2010GZ27 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76
S77 2010GZ28 9 13 4 19 13 3 18 3 21 14 23 13 17 17 1 76

Note: 15 loci including arcA, aroE, aspC, clpX, cyaA, dNaG, fadD, grpE, icdA, lysP, mdh, mtlD, mutS, rpoS and uidA and the primers can be accessed on the sharing EcMLST website (http://www.shigatox.net/ecmlst/cgi-bin/index). Each allele was assigned a different allele number and the allelic profile (string of fifteen integers) was used to define the sequence type (ST) based on the EcMLST website, which was established to provide a resource to investigators who can use this to assign the ST of further strains. New allele numbers and sequence type were submitted to the EcMLST curator for allocation. ST = Sequence Type.