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. Author manuscript; available in PMC: 2017 Apr 15.
Published in final edited form as: Cancer Res. 2016 Feb 9;76(8):2177–2185. doi: 10.1158/0008-5472.CAN-15-3139

Table 1.

CT-RCC HERV-E and control peptides used to stimulate T cells.

Name of protein Peptide name Peptide sequencea Score (BIMAS)b
CT-RCC HERV-E CR CR1 2-FLHKTSVREV 147
CT-RCC HERV-E CR CR2 11-VLSATIPAT 29
CT-RCC HERV-E Env SU1 137-SLNITSCYV 382
CT-RCC HERV-E Env SU2 150-TMGDQWPWEA 110
CT-RCC HERV-E Env TM1 53-LLLQIMRSFV 2406
CT-RCC HERV-E Env TM2 45-LLLPCLLPLL 309
CMV pp65 CMV 495-NLVPMVATV 160
Influenza matrix protein FLU 58-GILGFVFTL 551
a

Position of the starting amino acid in the protein is indicated.

b

Predicted binding scores to HLA-A*0201 using BIMAS computer assisted analysis.