Table 1. The sequences of primers and probes used in the real-time PCR assay for R. equi detection and for the internal control.
Primer | Target gene | Sequence (5′–3′) | Amplicon size |
---|---|---|---|
RhodF | choE | TCGCTCGACAAGACCTAC | 120 bp |
RhodR | TTCCATCGTCACGCTGT | ||
RhodP | FAM-AGCTGACGATCACGACTCTGCA-BHQ1 | ||
hB2M-F | equine β2-M | GACCTGTCTTTCAGCAAGGA | 113 bp |
hB2M-R | GGGTCTTTGAGAGTAGAGTG | ||
hB2M-P | ROX-TGGTGTGGATGAGTATAGTTGCCG-BHQ2 | ||
sB2M-F | swine β2-M | GATCCTTAACCCACTGAGC | 122 bp |
sB2M-R | AGAGTCAACTCAAAGTAGGTTTGTA | ||
sB2M-P | ROX- GTTCCTAGTCGGATTCATTAACCACTGC-BHQ2 |