Table 5.
Comparison of phenotypic antimicrobial susceptibility testing results with resistance determinants identified from WGS data in 46 strains.
| Antimicrobial | Phenotypic laboratory testing | Resistance determinant detection from WGS data |
|---|---|---|
| Ampicillin | 12 | 12 |
| Azithromycin | 13 | 13 |
| Chloramphenicol | 1 | 1 |
| Streptomycin | 18 | 18 |
| Sulfisoxazole | 18 | 18 |
| Nalidixic acid | 9 | 0 |
| Ciprofloxacin | 6 | 0 |
| Trimethoprim/Sulfamethoxazole | 18 | 18 |
| Tetracycline | 17 | 18 |
| No Resistance detected | 28 | 28 |
Values indicate the number of strains identified with resistance to the indicated antimicrobial.