Table 1. Genetic similarity (%) between the presumed transcribed regions of the 5S rDNA of Pseudis tocantins and those from several anurans obtained from GenBank.
P. tocantins type I 5S rDNA | P. tocantins type II 5S rDNA | |
---|---|---|
Anaxyrus americanusa | 81.36 (±4.41) | 79.39 (±4.48) |
Engystomops freibergi and E. petersi type I 5S rDNAb | 79.03 (±4.62) | 78.96 (±4.62) |
Engystomops freibergi and E. petersi type II 5S rDNAc | 70.83 (±5.04) | 82.68 (±4.30) |
Gastrotheca riobambaed | 78.73 (±4.64) | 82.02 (±4.23) |
Lithobates pipiens and L. catesbeianuse | 77.74 (±4.59) | 76.75 (±4.55) |
Pelophylax lessonae and P.ridibundusf | 79.50 (±4.60) | 80.18 (±4.52) |
Physalaemus cuvieri type I 5S rDNAg | 78.51 (±4.73) | 79.17 (±4.60) |
Physalaemus cuvieri type II 5S rDNAh | 67.76 (±5.26) | 82.31 (±4.20) |
Xenopus borealisi | 80.04 (±4.43) | 74.12 (±4.85) |
Xenopus laevis and X. tropicalis somatic 5S RNA genej | 77.74 (±4.60) | 80.04 (±4.39) |
Xenopus laevis and X. tropicalis oocytic 5S RNA genek | 75.98 (±4.61) | 77.31 (±4.38) |
Pseudis tocantins type I 5S rDNAl | - | 64.69 (±5.41) |
Pseudis tocantins type II 5S rDNAm | 64.69 (±5.41) | - |
Numbers in parentheses indicate the standard error. The regions corresponding to the primers 5S-A and 5S-B (used to isolate the 5S rDNA sequences of P. tocantins) were not considered in this comparative analysis.
aAnaxyrus americanus 5S rRNA gene—X58365.1 (as Bufo americanus)
bEngystomops freibergi type I 5S rRNA gene—JF325868.1-JF325870.1, Engystomops petersi type I 5S rRNA gene—JF325859.1—JF325867.1
cE. petersi type II 5S rRNA gene—JF325846.1-JF325858.1, E. freibergi type II 5S rRNA gene—JF325843.1-JF325845.1
dGastrotheca riobambae 5S rRNA gene—M74438.1
fPelophylax lessonae 5S rRNA gene—FJ572051.1; Pelophylax ridibundus 5S rRNA gene—FJ572052.1
gPhysalaemus cuvieri type I 5S rDNA—JF281126.2-JF281131.2
hP. cuvieri type II 5S rRNA gene—JF281132.2-JF281134.2
iXenopus borealis 5S rRNA gene—V01425.1
jXenopus laevis somatic 5S rRNA gene—J01009.1, Xenopus tropicalis somatic 5S rRNA gene—X12622.1 and NR 033271.1
kX. laevis oocyte specific 5S rRNA gene—J01010.1, J01012.1, M10635.1, M63899.1, X05089.1, X. tropicalis oocyte specific 5S rRNA gene -NR_033270.1, NR_033271.1, X12623.1, X12624.1
lsequences of type I 5S rDNA of Pseudis tocantins from this study
msequences of type II 5S rDNA from P. tocantins from this study.