Table 6.
DAVID domain analysis of chicken proteins isolated by RSV 5’ UTR (+1–380)
| Identifier term Domain term (Protein count) |
Fold enrichment p-value |
Proteins |
|---|---|---|
| IPR000504 RNA recognition motif, RNP-1 (6) |
7.5 1.12E-03 |
HNRNPD, SYNCRIP/HNRNPQ, SSB, HNRNPH1, NCL, HNRNPR |
| IPR012677 Nucleotide-binding, alpha-beta plait (6) |
7.4 1.16E-03 |
HNRNPD, SYNCRIP, SSB, HNRNPH1, NCL, HNRNPR |
| IPR004161 Translation elongation factor EFTu/EF1A, domain 2 (3) |
53 1.34E-03 |
GTPBP1, EEF1A1, EIF2S3 |
| IPR000795 Protein synthesis factor, GTP- binding (3) |
47 1.79E-03 |
GTPBP1, EEF1A1, EIF2S3 |
| IPR004087 K Homology (3) |
21 8.35E-03 |
FUBP3, HDLBP, RPS3 |
| IPR006535 HnRNP R and Q splicing factor (2) |
106 1.85E-02 |
SYNCRIP, HNRNPR |
| IPR006561 DZF (2) |
106 1.85E-02 |
ILF2, ILF3 |
| IPR004160 Translation elongation factor EFTu/EF1A, C-terminal (2) |
59 3.30E-02 |
GTBP1, EEF1A1 |
| IPR001023 Heat shock protein Hsp70 (2) |
44 4.38E-02 |
HSPA5, HSPA8 |
*
Started with terms with p value greater than 0.05, removed redundant domain categories, rounded fold enrichment and p values. Overrrepresented domains listed in order of decreasing statistical significance.