Table 1. Mosaicism level quantification and breakpoint characterization in 18 subjects with XLAG syndrome.
ID | Gender | Inheritance | ddPCR on parental DNA | DLRS | mosaicism level by aCGH | mosaicism level by ddPCR | Breakpoint features | Potential mechanism |
---|---|---|---|---|---|---|---|---|
S1 | M | Sporadic | both NA | 0.11 | 0.538 | 0.585 ± 0.016 | 12 bp microhomology | FoSTeS/MMBIR, MMEJ |
S11 | M | Sporadic | mother negative, father NA | 0.18 | 0.256 | 0.294 ± 0.014 | 2 bp microhomology | FoSTeS/MMBIR, MMEJ |
S15 | M | Sporadic | both NA | 0.15 | 0.161 | 0.182 ± 0.022 | 1 bp microhomology | FoSTeS/MMBIR, MMEJ |
F2A | M | Familial | both NA | 0.27 | 0.691 | NA | 2 bp microhomology | FoSTeS/MMBIR, MMEJ |
F1B | M | Familial | both NA | 0.14 | 0.769 | 0.854 ± 0.052 | 4 bp insertion | FoSTeS/MMBIR, NHEJ |
F1C | M | Familial | both NA | 0.15 | 0.785 | 0.845 ± 0.059 | 4 bp insertion | FoSTeS/MMBIR, NHEJ |
F1A | F | Familial | both NA | 0.14 | 1.030 | 0.839 ± 0.074 | 4 bp insertion | FoSTeS/MMBIR, NHEJ |
S2 | F | Sporadic | Both Negative | 0.24 | 1.377 | 1.312 ± 0.117 | 5 bp microhomology | FoSTeS/MMBIR, MMEJ |
S4 | F | Sporadic | Both Negative | 0.12 | 1.066 | 0.957 ± 0.010 | CGR with small insertions and microhomology at breakpoint junction | FoSTeS/MMBIR |
S5 | F | Sporadic | both NA | 0.13 | 1.099 | 1.032 ± 0.026 | 5 bp insertion | FoSTeS/MMBIR, NHEJ |
S6 | F | Sporadic | Both Negative | 0.13 | 0.999 | 0.944 ± 0.033 | 2 bp microhomology | FoSTeS/MMBIR, MMEJ |
S7 | F | Sporadic | both NA | 0.14 | 1.041 | 0.944 ± 0.051 | 3 bp microhomology | FoSTeS/MMBIR, MMEJ |
S8 | F | Sporadic | both NA | 0.14 | 0.911 | 0.968 ± 0.057 | 3 bp microhomology | FoSTeS/MMBIR, MMEJ |
S9 | F | Sporadic | both NA | 0.24 | 0.963 | 1.017 ± 0.034 | 4 bp microhomology / 7 bp microhomeology | FoSTeS/MMBIR, MMEJ |
S10 | F | Sporadic | both NA | 0.16 | 0.758 | 0.986 ± 0.048 | 4 bp microhomology | FoSTeS/MMBIR, MMEJ |
S14 | F | Sporadic | both NA | 0.16 | 1.150 | 0.994 ± 0.007 | 3 bp microhomology with an 8 bp deletion nearby | FoSTeS/MMBIR, MMEJ |
S13 | F | Sporadic | Both Negative | 0.11 | 0.806 | 0.974 ± 0.040 | 52 bp insertion | FoSTeS/MMBIR, MMEJ |
S16 | F | Sporadic | both NA | 0.14 | 0.845 | 0.915 ± 0.033 | 291 bp insertion | FoSTeS/MMBIR, MMEJ |