TABLE 3.
Number of genes associated with 25 general COGs functional categories
| Code | Value | % Value | Description |
|---|---|---|---|
| J | 174 | 5.18 | Translation |
| A | 0 | 0 | RNA processing and modification |
| K | 248 | 7.38 | Transcription |
| L | 133 | 3.96 | Replication, recombination and repair |
| B | 1 | 0.02 | Chromatin structure and dynamics |
| D | 34 | 1.01 | Cell cycle control, mitosis and meiosis |
| Y | 0 | 0 | Nuclear structure |
| V | 64 | 1.90 | Defense mechanisms |
| T | 152 | 4.52 | Signal transduction mechanisms |
| M | 132 | 3.93 | Cell wall/membrane biogenesis |
| N | 41 | 1.22 | Cell motility |
| Z | 1 | 0.02 | Cytoskeleton |
| W | 0 | 0 | Extracellular structures |
| U | 48 | 1.42 | Intracellular trafficking and secretion |
| O | 95 | 2.82 | Posttranslational modification, protein turnover, chaperones |
| X | 14 | 0.41 | Phages, Prophages, Transposable elements, Plasmids |
| C | 163 | 4.85 | Energy production and conversion |
| G | 216 | 6.84 | Carbohydrate transport and metabolism |
| E | 317 | 9.44 | Amino acid transport and metabolism |
| F | 80 | 2.38 | Nucleotide transport and metabolism |
| H | 95 | 2.82 | Coenzyme transport and metabolism |
| I | 131 | 3.90 | Lipid transport and metabolism |
| P | 169 | 5.03 | Inorganic ion transport and metabolism |
| Q | 85 | 2.53 | Secondary metabolites biosynthesis, transport and catabolism |
| R | 487 | 14.50 | General function prediction only |
| S | 269 | 8.01 | Function unknown |
| — | 1183 | 35.23 | Not in COGs |
COGs, Clusters of Orthologous Groups database.