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. 2016 May 5;8:119–120. doi: 10.1016/j.gdata.2016.05.004
Specifications
Organism/cell line/tissue Adzuki bean (Vigna angularis)/leaves
Sex N.A.
Sequencer or array type HiSeq2000
Data format Raw and processed
Experimental factors De novo transcriptome assembly of two adzuki bean varieties
Experimental features Leaves of ten adzuki bean plants (five of the Taejin Black variety and five of the Taejin Red variety) were harvested for total RNA extraction. Two prepared libraries were paired-end sequenced using the HiSeq 2000 system. The obtained data for each variety were subjected to de novo transcriptome assembly using Trinity, and coding regions were predicted by TransDecoder. We performed BLASTP against the Swiss-Prot protein database to annotate the identified proteins.
Consent N/A
Sample source location Hoengseong, South Korea (37°28′49.6″N 127°58′34.3″E)