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. 2016 May 25;6:26655. doi: 10.1038/srep26655

Table 1. Human or swine TTV- specific PCR assays used for the assessment of the human and swine sera.

PCR PCR Type Target Forward Primer Reverse Primer Size (bp) BLASTresults
Pan-Human TTV qPCR Untranslated region (Conserved) 5′gtaagtgcacttccgaatggctgag3′ 5′gcccgaattgcccttgac3′ 132 aAB041007.1
aAF122915.1
bKJ082064.1
bAY590626.1
Pan-TTSuV UTR 1 qPCR Untranslated region (Conserved) 5′cgaatggctgagtttatgcc3′ 5′gataggccccttgactccg3′ 95 aKR054745.1
a,bKR131718.1
bHM633251.1
bKR054745.1
TTSuV1- UTR 2 Gel-based Untranslated region (Conserved) 5′gcggtcaaaatggcggaag3′ 5′ggacttgagctcccgaccaa3′ 124 aEU564163.1
aJF451574.1
bEU006509.1
bJX872390.1
TTSuV1-ORF2 Gel-based ORF2 (Variable) 5′agtcaagcttttgccggaacactgggaggaag3′ 5′acgtctcgagccagccatcgtcgccgat3′ 235 aJX535326.1
aHM633254.1
bHM633254.1
bJX535326.1
TTSuV1-ORF3 Gel-based ORF3 (Variable) 5′gcgacgatggctgtttggaggtgaaataccaaccc3′ 5′acgtctcgaggcgtttcttttgttttttat3′ 477 aHM633244.1
aHM633254.1
bHM633254.1
bJX535326.1

aTop 2 nucleotide BLAST results obtained from the sequenced PCR amplicons two swine samples.

bTop 2 nucleotide BLAST hits obtained from the sequenced PCR amplicons of two human samples.