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. 2016 May 25;6:26662. doi: 10.1038/srep26662

Table 2. Detailed information about Genotype/Allele of SNPs for GAS6/PROS1 Gene with Behcet Disease in the First and Replication Stage.

SNP Stage Genotype/Allele Case (freq.) Control (freq.) P value Pc value OR(95% CI)
rs9577873 1st stage CC 339 (0.823) 443 (0.724) 2.57 × 10−4 2.42 × 10−2 1.772(1.301–2.413)
    CT 69 (0.167) 159 (0.26) 4.97 × 10−4 4.67 × 10−2 0.573(0.418–0.786)
    TT 4 (0.01) 10 (0.016) 0.37 NS 0.590(0.184–1.895)
    C 747 (0.907) 1045 (0.854) 3.96 × 10−4 3.72 × 10−2 1.662(1.252–2.206)
  2nd stage CC 409 (0.826) 865 (0.741) 1.61 × 10−4 1.51 × 10−2 1.666(1.276–2.175)
    CT 80 (0.162) 283 (0.242) 2.71 × 10−4 2.55 × 10−2 0.603(0.458–0.793)
    TT 6 (0.012) 20 (0.017) 0.452 NS 0.704(0.281–1.765)
    C 898 (0.907) 2013 (0.862) 2.97 × 10−4 2.79 × 10−2 1.566(1.226–2.000)
  combined CC 748 (0.825) 1308 (0.735) 2.03 × 10−7 1.91 × 10−5 1.698(1.389–2.075)
    CT 149 (0.164) 442 (0.248) 6.59 × 10−7 6.19 × 10−5 0.595(0.484–0.731)
    TT 10 (0.011) 30 (0.017) 0.238 NS 0.650(0.316–1.336)
    C 1645 (0.907) 3058 (0.859) 5.23 × 10−7 4.92 × 10−5 1.598(1.329–1.921)
rs4857037 1st stage AA 363 (0.881) 476 (0.778) 2.52 × 10−5 2.37 × 10−3 2.117(1.486–3.016)
    AG 48 (0.117) 131 (0.214) 5.57 × 10−5 5.24 × 10−3 0.484(0.339–0.692)
    GG 1 (0.002) 5 (0.008) 0.238 NS 0.295(0.034–2.537)
    A 774 (0.939) 1083 (0.885) 3.18 × 10−5 2.99 × 10−3 2.015(1.441–2.819)
  2nd stage AA 429 (0.867) 912 (0.781) 5.10 × 10−5 4.80 × 10−3 1.825(1.360–2.448)
    AG 62 (0.125) 246 (0.211) 4.18 × 10−5 3.93 × 10−3 0.537(0.397–0.725)
    GG 4 (0.008) 10 (0.009) 0.922 NS 0.943(0.294–3.022)
    A 920 (0.929) 2070 (0.886) 1.59 × 10−4 1.49 × 10−2 1.689(1.283–2.222)
  combined AA 792 (0.873) 1388 (0.78) 4.81 × 10−9 4.52 × 10−7 1.945(1.552–2.437)
    AG 110 (0.121) 377 (0.212) 8.42 × 10−9 7.91 × 10−7 0.514(0.408–0.646)
    GG 5 (0.006) 15 (0.008) 0.406 NS 0.652(0.236–1.800)
    A 1694 (0.934) 3153 (0.886) 1.96 × 10−8 1.85 × 10−6 1.822(1.474–2.253)

Pc value: the Bonferroni correction P value; NS: not significant.